Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1226 |
Symbol | |
ID | 8357342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1467505 |
End bp | 1469706 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963382 |
Product | hypothetical protein |
Protein accession | YP_003120925 |
Protein GI | 256420272 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000503641 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0807191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT TTATAACTGT TATCTTATTG CTGGTTACCC TACAGGTGAC CCTGGTGCAT GCTCAGACGA CTCAGAAAAT TGATATACCT ATCGGACGAA TTGGTTTCCA TGATAATATC GATAAAGAAC AGGCTGCCGC ACTGAAATTT GACGGAAAGG CGGACGACCT GGTACGTGTT TCGGATGATC AGACGATCAA TCTGCAGGTG ACGGATGCGC TCATCAAACA GATTGACGAT ATGCAGACCC AGATTGAACT GGATTCTGCC CTGGACCATC GTCTGAAGAT CAAATACCTG TCCGGGCTCT ATGTGATGAT CCACGATTAT AACATCAAAC GTACCTACAC CCGGATCGCC CCGGAGGAGG CGCCCGTGAT GGTGACCGCT TACCGTGAGA TGATGAAGGC TGATATAAAG GGTCAAAGTA TTCTACCTTA TGTTTATCCT TTGTCTTTCG ACGCAGGTGA ACGTATGATA GAGCCATTCA AAGACAACCC GGGGTATAAA GACGCCCGCG GAGTATTGTT TGCAAAATTT GCTTTCAATA ACCTGGAAAC GGTGATGTCC CAGATAGGCA ATTACCTGGA ATATCCGGCT ACAGACTCTG TTATTGCAGC CGTAGCCAGG AAGTATCCTA ACCAGGTGCT GACTTACGCT ACTTCATATA CGCCGGTGGC TACCGCCATT AAAAAGAATC CTGATCCGAT CGTACAGCTG ATCGTACAGA TAGGTAATTC CGGTAATTCT ACACTGATCC TTCCGTTTAT CGATGAACTG ATGGCAGGAA CAACAACCGT GGACAAACTT TCTGCCGTAG TAGAAAATGA GGATAAATAC TTCAGACAAC TGGTGAAAAG CGCCATTGTG CTGCAGCACA GAAAGAACAA CGGAGAAAAC ATCATTGGTC TGAAAGCCAT GCTGGAAAAT ATGCAGGCAC GCTCCCTGCG TTACATCCGT GAGATGAACG ACCTGCATGA AGAGCCTGCC AATGTGCGTT TCAGAATTGT AAAAGACTTT AGCCCGGAAG AACTGTACTA CCTGATTGTA AACGGTCAGG AAGAGCTGTA TACTTCCAGT TATACTAATC ATAATAACGC CGGTTTATAC GATCAGATGA TGGCGCGTAT GAAACCTCCA CGTGGAGACA GTCTGCTGAT GCTGGTGGAA TTTGACAGGT TCAAAAAGTT CATCGCTATG GCAGCCGGTT TTAATACCCT GGACAACTTC CTGAAGTCAA TGGCGCCGGA GAATGCAAAC TACCTCATGA AGAAGTATGT GAGCAGTCTT GAGAAAACAG AAGACCTGGA AGATGCGGTG GACGTAGCCA ACTCATTTGG TAGTATCCGC GATCCGAAAT TACTGGCTTT CCTGCGTGAA GAAGTGCAGA AAAACTATAC GTTCGTATCC CGTAAGAAAG ACAGAAGAGG TACCGTGATC TATGAATTGC TGGGCAGTCT TTTCGATACG GAAAACAACA GCGGCAGCGA TTCTACCAAA GCGAGTCAGA TGGCCGCCAA ACTGCAATTG CCCCCGATCA ACTTCGTGAC TTATAACGCA TTACTGAGCG ATAGCGGCCG TGTATACCAG CAGGTATTCT TCTATGGAGA TAAAGATGGT CATGATTCAT ACGTGAGCTT CATGGGTAAC TTCCCTGCCA GCGAGTGGAA GATCAGTAAA AACAAATACT GGACAACTAT TCAGTCTACC AAAGGCAAGC CGATCACCAT CTACGCCAAC CTGCCACTGG AAGAGCCGGA AGATAAAACA GCGATCGAAA AGCTGAGTGA ATACCTGGAT GAAAATGATA TTCATCCGAC CGTATTCATC CACCGCGGTC ACAGTTATCA TGTGAATACA ACACTGGATA ACTTACAGAG CTCTGCGAAG ATTGTTGTAC TGGGTTCCTG TGGTGGTTAT CATAACCTTG CGATTGTATT GCAGAAATCG CCTGAAGCAC ATATCATCTC TTCTAAGCAG GTGGGTACGC GTTTCGTGAA TGAACCGATT ATCCGCACCC TGGACGAGAC GATCCGTGCC GGTAAGAATG TTGACTGGGT ACAGATGTGG GCAGTATTGG GCAAACGCTT TGCAGGCGAC GCCCGTAACA AGGAGCTGTT CAGCGACTAT GTGCCTCCGC ACAAAAACCT GGGCGCTATT TTTATCAAGG CCTACAAACA GATCATGAAG GAAGACAAGT AA
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Protein sequence | MKRFITVILL LVTLQVTLVH AQTTQKIDIP IGRIGFHDNI DKEQAAALKF DGKADDLVRV SDDQTINLQV TDALIKQIDD MQTQIELDSA LDHRLKIKYL SGLYVMIHDY NIKRTYTRIA PEEAPVMVTA YREMMKADIK GQSILPYVYP LSFDAGERMI EPFKDNPGYK DARGVLFAKF AFNNLETVMS QIGNYLEYPA TDSVIAAVAR KYPNQVLTYA TSYTPVATAI KKNPDPIVQL IVQIGNSGNS TLILPFIDEL MAGTTTVDKL SAVVENEDKY FRQLVKSAIV LQHRKNNGEN IIGLKAMLEN MQARSLRYIR EMNDLHEEPA NVRFRIVKDF SPEELYYLIV NGQEELYTSS YTNHNNAGLY DQMMARMKPP RGDSLLMLVE FDRFKKFIAM AAGFNTLDNF LKSMAPENAN YLMKKYVSSL EKTEDLEDAV DVANSFGSIR DPKLLAFLRE EVQKNYTFVS RKKDRRGTVI YELLGSLFDT ENNSGSDSTK ASQMAAKLQL PPINFVTYNA LLSDSGRVYQ QVFFYGDKDG HDSYVSFMGN FPASEWKISK NKYWTTIQST KGKPITIYAN LPLEEPEDKT AIEKLSEYLD ENDIHPTVFI HRGHSYHVNT TLDNLQSSAK IVVLGSCGGY HNLAIVLQKS PEAHIISSKQ VGTRFVNEPI IRTLDETIRA GKNVDWVQMW AVLGKRFAGD ARNKELFSDY VPPHKNLGAI FIKAYKQIMK EDK
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