Gene Cpin_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1221 
Symbol 
ID8357337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1461618 
End bp1463102 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content46% 
IMG OID644963377 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_003120920 
Protein GI256420267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000232729 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGATG TAAATAAGCT GCTGGATATC CTACTGTACC ATAAAGATGA TCCATTACTG 
TTAAACAGCG CTTTTTTCCT GTATTACTTT GCCACTTTTT TACTCTGCTA CCTGGCGGTA
TCCAGAAGTA AAGAAGGGAG GGTGGCTGTA TTCACCATCT TTTCACTTTA TTTCTTCTAT
AAAGCCTGCG GCATGTTTGT CGGGCTTGTA ATTCTTTCAG CGATCGTTGA CTTTAATCTG
TCCCGCTGGA TCTACCAGTC AGAAGATGAC CGAAAACGAA AGGGGCTGCT GATACTCAGT
ATCGTGCTGA ACCTCGGATT GTTGTTTTAT TTCAAGTACA CCGACTTCTT TATTGGTATC
GTCAACCAGG TATCCAACGG AGATATTCCT CTCCTGAAAC TGATGCTGCC AATCGGTATT
TCGTTCTATA CATTTGAGAA CCTCAGTTAT ACGGTAGACG TATACAGGAA AGAATTCAAG
CCGGTGGACA GTTTCATGGA TTACCTTTTC TTCCTGTCAT TTTTCCCTAA ACTGATGATG
GGACCGATCG TAAGGGCACA TGACTTTATT CCGCAGATCG ATAAGCCGTA TGAACTGAAT
TCCGAAGACA TCGGAAAAGG GATGTACCTG ATCATGGCCG GTCTGTTCAA GAAGATGGTG
ATCTCCGACT TTATCTACCA GAACTTTGTA CAATATATTT TCGATGATCC TTCCAAACAC
ACCGGTCTGG AATGTCTGCT CGGTGTATAT GGTTATGCGC TGATTATCTA TTGTGACTTT
TCGGGGTATT CTGATATTGC TATAGGTATC GCCCGCTGGA CCGGCTTTAA GATTCCGCCA
AACTTTGATT CTCCTTACCA GAGTTCCAAT ATTACAGAGT TCTGGCGTCG CTGGCATATC
TCCTTGTCTT CCTGGCTGAG AGACTATCTG TATATCCCGC TGGGAGGTAA CCGTAAAGGG
AAGTTCCGTC AGTACATTAA CCTGGGACTG ACCATGCTGA TTGGTGGTTT CTGGCATGGT
GCGAACTGGA ATTTCATCTT CTGGGGAGCG ATGCACGGTG GCGCACTGGC AGTAGATAAG
GTACGCCTGG ACTGGCTGAA GAAACGCGGT GGCGGTGCTA CCGGTTGGTT GGGGAATGTC
CTGAAAGTGG GTGGTATCAT TGTTACCTTT CATTTCGTCT GCTTCTGCTG GGTATTCTTC
AAAGCCAGCA CTTTCCAGGA CGCCTGGAGC CTGTTGCACC AGGTAGCGTT TGATTTTCAA
CCGGAAGTTT GGCTGGAGCT TTATAATGGT TACACCGCAG TATTCTGGGT AATGTTGCTG
GGCTTTATAC TGCATTTCCT GCCGAAACGT ACGGAAGTAT TTACAGAACA GTCCCTGTCA
AAGGTACCTG TGGTAGCGAA TGTGGCGATT ATGGTGATCT TCTTCTGGAT CCTGATCCAG
GTGAAGTCTT CCGAGACCAT GATGCCTATT TATTTGCAGT TCTAA
 
Protein sequence
MIDVNKLLDI LLYHKDDPLL LNSAFFLYYF ATFLLCYLAV SRSKEGRVAV FTIFSLYFFY 
KACGMFVGLV ILSAIVDFNL SRWIYQSEDD RKRKGLLILS IVLNLGLLFY FKYTDFFIGI
VNQVSNGDIP LLKLMLPIGI SFYTFENLSY TVDVYRKEFK PVDSFMDYLF FLSFFPKLMM
GPIVRAHDFI PQIDKPYELN SEDIGKGMYL IMAGLFKKMV ISDFIYQNFV QYIFDDPSKH
TGLECLLGVY GYALIIYCDF SGYSDIAIGI ARWTGFKIPP NFDSPYQSSN ITEFWRRWHI
SLSSWLRDYL YIPLGGNRKG KFRQYINLGL TMLIGGFWHG ANWNFIFWGA MHGGALAVDK
VRLDWLKKRG GGATGWLGNV LKVGGIIVTF HFVCFCWVFF KASTFQDAWS LLHQVAFDFQ
PEVWLELYNG YTAVFWVMLL GFILHFLPKR TEVFTEQSLS KVPVVANVAI MVIFFWILIQ
VKSSETMMPI YLQF