| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1203 |
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| Symbol | |
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| ID | 8357319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1431514 |
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| End bp | 1433064 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963359 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003120902 |
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| Protein GI | 256420249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0112543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA ATACACCTGC TAAGAAAGGA TTTTCCCCTT TCAAGGAAAA TAAAAGCAGC
AGTTCCAATA AAGGTGGTCA ACGCTTTGGC AACACTGACC GCAAAAGAGG TGATGACGAA
AAGCCGGGTC GCGGCGATAA AAGAGGTGAA CGCCCTTTCC GCAGCGAACG CAGTGATAAA
GAAAACAATG GCCGCGAAGC ATCCAAAAGA GGTGAGCGTC CTTTCCGTCC TGCACGTAAG
GACGACGATA ACAAGGAGCG CGGAGATTTT AAAAGAAACG AACGCCCTTT CCGCCCTGCA
CGCAAAGACG ACGATAACAG GGAGCGCGGA GATTTCAAAA GAAATGAACG TCCTTTACGT
CCTGCACGTA AAGACGATGA CAATAAAGAC CGTGGCGATT TCAAAAAAAG TGACCGCCCT
TTCCGTACCG AACGTAAAGA GAATGATGGC GAACACAAAG GTCCACGCGG CTTCCGTAAG
GACGGTGGTG AAAAACCAGC TTCTAAACGT CCTGAAAGAG ATGAAAACGG CCGCAGACGC
CGCATAGAGC CGGTACGCAA AACGGCCAGC GGCAGAACGC CATTCAAACC AAAGCCACAA
CAGGCGGACG ACAGTGCTTT CCATGGCACT GACGATAAAA AAGCCGGTAA ACGCGGTAGC
AGAGACGAAC GTCCTACGCC AAGCGGCTTT AACCGTAAAA AATATTTCGA TACTGCTAAC
GAGCGCTTTG CCGGTAAACA GGATCGTAAA CTGGCTACCA GAAGGGCTCG TCATGAAGAT
GATTCATATG GTAAAAGATC GTCTAAGAAT GAAGAATCCG GTAACGCACC AGGCGAAATG
CCGCTGAATA AATACATCGC ACACTCCGGC CTTTGTTCCC GTAGAAAAGC AGTGGACTTT
GTCAAGGAAG GAAAAGTGAC CGTAAATGGC GAACTCATTA CTGAGCCGGC GTTTAAGGTA
ACTGCAAAAG ACGAAGTAGC GATCAACAAC AGGAAGATCA ATATCCAGAA AAACCTGGTA
TATATTCTGT TGAACAAACC AAAAGGATAC ATCACTACCA CTGATGATCC GGAAGGCCGT
AAAACAGTCA TGGAACTGAT CCAGGACGCC ACTACAGAAG AACAGCGCGT ATATCCTGTA
GGCCGTCTTG ACCGTAATAC ATCTGGTTTG CTGCTGCTGA CCAATGATGG CGAACTGGCG
CAGAAACTGG CGCATCCGAA ACACAATATC AAAAAGATTT ATCACGTAGG ACTGAATAAA
CCACTGACCA AAGCGCACTT TGAAAACATT CTGCAAGGGG TGACTCTGGA AGATGGTGTG
GCCAATGTAG ATGCACTTGG ATACGTGGAA GCCGGTGATA AAACACAGGT TGGTATTGAA
ATTCACAGTG GTAAAAACCG TATCGTACGC CGCATTTTCG AACACCTAGA ATACGAAGTG
GAAAAACTGG ACCGTGTTAC TTACGCCGGT CTTACCAAGA AGAACATCAA CCGTGGTAAA
TGGCGTTTCC TGACAGAAAA AGAGATCATC CTTCTGAAGC ACTTTAAGTA A
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| Protein sequence | MRKNTPAKKG FSPFKENKSS SSNKGGQRFG NTDRKRGDDE KPGRGDKRGE RPFRSERSDK
ENNGREASKR GERPFRPARK DDDNKERGDF KRNERPFRPA RKDDDNRERG DFKRNERPLR
PARKDDDNKD RGDFKKSDRP FRTERKENDG EHKGPRGFRK DGGEKPASKR PERDENGRRR
RIEPVRKTAS GRTPFKPKPQ QADDSAFHGT DDKKAGKRGS RDERPTPSGF NRKKYFDTAN
ERFAGKQDRK LATRRARHED DSYGKRSSKN EESGNAPGEM PLNKYIAHSG LCSRRKAVDF
VKEGKVTVNG ELITEPAFKV TAKDEVAINN RKINIQKNLV YILLNKPKGY ITTTDDPEGR
KTVMELIQDA TTEEQRVYPV GRLDRNTSGL LLLTNDGELA QKLAHPKHNI KKIYHVGLNK
PLTKAHFENI LQGVTLEDGV ANVDALGYVE AGDKTQVGIE IHSGKNRIVR RIFEHLEYEV
EKLDRVTYAG LTKKNINRGK WRFLTEKEII LLKHFK
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