| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1202 |
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| Symbol | |
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| ID | 8357318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1430767 |
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| End bp | 1431510 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963358 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003120901 |
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| Protein GI | 256420248 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.90311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0231079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTA ACGACATCAT CATAAAAGAA ACGGCAGACT TTGTTATTCT GAACAAACCT
GCAGGTATGC TGACCATTCC GGACAGGCAT GATAACCAGC TGGATTCCCT CCAGGGATTG
CTGAAAAAGC ATTACGGTGA AATCTTCACG GTACACCGCC TGGATAAAGA CACCAGTGGC
GTGATCCTGT TTGCCAAAAA TGAGGTAGCC CACAAATATT ATTCGCAGCT GTTCGAAGGC
CGTAATGTGA AGAAATTCTA TAAAGGCCTG GTAAACGGAC AATTACACCC GGAAACCGGC
AGCGTGGATG AAGCCATTAT GGAGCATCCG ACCATCAAAG GCAGAATGGT GACCAACAGA
AAGGGTAAAA ACGCCCAGAC TGACTATCAG GTATTAGAAG CATTTGGCCT CTACAGCCTG
GTGCAATTAC AGATCCATAC AGGCCGTACC CACCAGATTC GCGTACATAT GAAGCATCTG
GGCCATCCGA TCGCCGTAGA CGAGCTATAT GGTACTGCTG CGCCGGTTTA TCTGTCTGCT
ATCAAGAAGA ACTATAAACT GGGTAAAAGA GTAGAGGAAG AACGTCCGCT GCTGAGCCGA
CTAGGACTGC ACGCGTGGCA GTTGCAATTC AAAGATCAGC AGGGAGAAGA AAACGTGATT
GAAGCCCCGC TGCCAAAAGA TATTCAGGCA GTTGTAACGC AGCTGCGTAA AAACAGCGGC
AGAAGCACAG AGCTGGTTTT ATAA
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| Protein sequence | MRINDIIIKE TADFVILNKP AGMLTIPDRH DNQLDSLQGL LKKHYGEIFT VHRLDKDTSG
VILFAKNEVA HKYYSQLFEG RNVKKFYKGL VNGQLHPETG SVDEAIMEHP TIKGRMVTNR
KGKNAQTDYQ VLEAFGLYSL VQLQIHTGRT HQIRVHMKHL GHPIAVDELY GTAAPVYLSA
IKKNYKLGKR VEEERPLLSR LGLHAWQLQF KDQQGEENVI EAPLPKDIQA VVTQLRKNSG
RSTELVL
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