Gene Cpin_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1169 
Symbol 
ID8357285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1391787 
End bp1392341 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID644963325 
Productstress protein 
Protein accessionYP_003120868 
Protein GI256420215 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA ATCTGCAAAA AGGAGAAAGA GCCAATATCG AATTACCAAA ATTCACTATT 
GGCTTAGGAT GGGATATCAA TGAATCACAT ACAGGCGGAG AATGTGACCT GGATGCTTCT
GTATTTCTCT TAGGTGAAAA CAGGAAGATC ATATCAGATC CGTATTTCGT GTTTTATAAC
AACCTGGAAT CTCCTGATGG CGCTGTAAAA CATTCCGGCG ACAACCGTAC TGGCGCCGGT
GATGGCGATG ATGAAACCAT CCATGTAGAC CTCTCTGTTA TTAACCCTGC TGTAAAAGAA
ATCTGTGTGG TTGTTACCAT TCATGAAGCA GCTGCGCGTA AACAGAATTT TGGTCAGATC
CGCAATTCAT TTATCCGCAT TTATGATGCT GCGAAAAATG TAGAGCTGGT GAAATATGAA
CTGGGAGAAG ATTTCTCTAT CGAGACTTCA GTTGAATTCG GCCGTATCTA CAAACGCGAA
AACCAATGGC GTTTTGAAGC GGTAGGTATT GGACAGAGCG GCGGACTGGA ACAGTTCCTT
TCAAAATACG CTTAA
 
Protein sequence
MAINLQKGER ANIELPKFTI GLGWDINESH TGGECDLDAS VFLLGENRKI ISDPYFVFYN 
NLESPDGAVK HSGDNRTGAG DGDDETIHVD LSVINPAVKE ICVVVTIHEA AARKQNFGQI
RNSFIRIYDA AKNVELVKYE LGEDFSIETS VEFGRIYKRE NQWRFEAVGI GQSGGLEQFL
SKYA