Gene Cpin_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1164 
Symbol 
ID8357280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1388332 
End bp1388907 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID644963320 
Productstress protein 
Protein accessionYP_003120863 
Protein GI256420210 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA ATTTATCGAA GGGACAAAAA ATCGACATCG GGCTTTCCAA AATCAGCGTA 
GGTCTGGGTT GGAATCCAAA TGAGGGGACG GGCAATGATT TTGATCTTGA TGCATCCGCG
TTTATGATTG ATAATAACAG GTTAATTCCT GGCGAAGGTT ACTTTGTATT CTACGGTAAT
ACCACGTCAC CGGATGACGC CCTGCTCCAT ACAGGCGACG ATCCTACCGG TGGAAACAGT
GCAGACGGAG ATGATGAAAC CATCCGGGTG GATCTGTCCA AAGTAAATGC TGATATCAAA
GAAATACTGT TTGTTGTAAC CATCCACGAT GCTGCTACAC GCAGACAGAA TTTCGGTCAG
GTAAGAAACT CATATATCCG TATCGTTGAT GATGCAAGCG GCGAGGAAAT AGCTAAATAC
GAGCTGGGAG AAGATTTCTC CGTAGAGACG GGCGTTGAAT TCGGCCGCCT CTACCAAAGA
GATGGCAAAT GGCGTTTCGA GGCATCCGGT ATCGGATATA AAGAAGACCT GGCTTATTTC
CTGGGCAAAT ACTACAAAGG ACAAATCATC AAATAG
 
Protein sequence
MAINLSKGQK IDIGLSKISV GLGWNPNEGT GNDFDLDASA FMIDNNRLIP GEGYFVFYGN 
TTSPDDALLH TGDDPTGGNS ADGDDETIRV DLSKVNADIK EILFVVTIHD AATRRQNFGQ
VRNSYIRIVD DASGEEIAKY ELGEDFSVET GVEFGRLYQR DGKWRFEASG IGYKEDLAYF
LGKYYKGQII K