Gene Cpin_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1146 
Symbol 
ID8357262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1370170 
End bp1370955 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID644963302 
Productprotein of unknown function DUF124 
Protein accessionYP_003120845 
Protein GI256420192 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000459152 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0631256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCA ACCATGAAAT AGATTACCGT ATCTATGGCG AAGAAATACA GATTGTCGAG 
ATTGAGCTAG ATCCACAGGA GACTGCAATT GCTGAGAGCG GCAGTTTTAT GATGATGGAT
CAGGATATTC AGATGCAAAC TATGTTCGGG GATGGTTCAC AAGCTAATCA GGGAATTTTT
GGCAAACTGG TATCAGCAGG CAAGCGCATG CTGACCGGGG AGAGCCTTTT TATGACTGCT
TTCACGAATA TGGGGCAGGG TAAGAAGAAG GTGAGTTTTG CCGCGCCTTA TCCGGGTAAG
ATCATTCCAA TGGATCTGCA GCGGATGGGT GGCAAGGTGA TCTGTCAGAA GGATGCGTTC
CTTTGTGCAG CGAAAGGTGT TAGTATTGGG ATTGAATGGC AACGTAAGCT CGGAACCGGC
ATTTTTGGCG GTGAAGGCTT TATTATGGAG AAGCTGGAAG GGGATGGTAT GGCCTTTGTG
CACGCAGGGG GGATGGTTAT CGAAAGAGAC CTTTTACCCG GTCAGGTATT AAAAATAGAC
ACAGGTTGTG TGGTAGCATA TACTTCAGGA GTGCATTTTG ACGTTGAATT TGTAAAAGGA
ATCAGAAATA TGGTATTTGG TGGCGAAGGA TTGTTTTTTG CCACTTTAAG AGGTCCTGGT
AAAGTATGGA TACAGTCCTT ACCTATCAGC AGAATGGCCG CAAGACTGGT GTCTTATGGT
ACAGGGAAGC GTAAGGAAGA AGGCAGTATT CTGGGTGGGC TTGGTAATTT ACTGGACGGA
GATTGA
 
Protein sequence
MRRNHEIDYR IYGEEIQIVE IELDPQETAI AESGSFMMMD QDIQMQTMFG DGSQANQGIF 
GKLVSAGKRM LTGESLFMTA FTNMGQGKKK VSFAAPYPGK IIPMDLQRMG GKVICQKDAF
LCAAKGVSIG IEWQRKLGTG IFGGEGFIME KLEGDGMAFV HAGGMVIERD LLPGQVLKID
TGCVVAYTSG VHFDVEFVKG IRNMVFGGEG LFFATLRGPG KVWIQSLPIS RMAARLVSYG
TGKRKEEGSI LGGLGNLLDG D