Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1145 |
Symbol | |
ID | 8357261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1366424 |
End bp | 1369999 |
Gene Length | 3576 bp |
Protein Length | 1191 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963301 |
Product | acriflavin resistance protein |
Protein accession | YP_003120844 |
Protein GI | 256420191 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000258261 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.148502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA ACCTGAATAA AGAATTTAAA CCTACCAGCT GGTCCATTGA TAATAAGGTA AGCATTTATG TGGCTACCAT TATCCTGGCC CTCGCAGGTA TTATGTCCTA TCAGAGCCTG CCGAAGGAAC AGTTTCCGGA AGTAGTGTTT CCTCAGTTCT ATATCAGCAC CATTTACAGC GGTACTTCTC CGGAAGACAT GGAGACGTTG GTGACGAAAC CTATAGAAAA ACAATTGGGT GGTATTTCCG GTGTGAAGTC TATCAAGAGT ACTTCCATGC AGGACTATTC TGCCATCACG ATAGAATTTG ACGCGAGTGA GAATATGGAA ACTGCGCGGC AGGAAGTACG TGAGAAAGTA GATGATGCGA AGAAAGATCT GCCAAACGAC CTTACACAGG AACCACAGAT CATCAAGATA GACGTATCGC AGATACCTAT CATGAACGTG AACCTGTCAG GTGATTTTGA TCTGCAGTCA CTGAAGAAGT ATGCAGATGA AATGCAGGAC CGCATCGAGG CGTTGAATGA AATTACCCGT GTGGATATTG TCGGCGCATT GGAAAGAGAG ATCCAGATCA ACGTCGATAA ATACAAAATG GACGCGGCGA AGATCACCTT TGACGACGTA GCTAATGCGA TCGCGATGGA AAACCGCACC ATCTCCGGTG GTCTGGTTTC TATGGATGGA CAGAAGCGTA CATTGAGTGT GAAAGGTGAA TACAAAGATG CTAATAAGAT ACGCGATATC GTTGTACGTG GTATGTCAGG TGCAACGGTA TACCTGAAAG ATGTAGCAGA AGTAGTAGAC GGTTTTGAAG AGCAGGAAAG TTACGCGCGT CTGGATGGCA AGAATGTAAT CACCCTCAAC GTGATCAAAC AGAGCGGTAA AAACCTGATC GACGCATCCG ATAAGATCCG TGTTATCATT GATGAAATGA AGGCAGATTA TCTGCCTGCG GGACTGGATG TAACTGTTAC TGCTGATCAG TCCAACTCTA CGCGTGTAAC GCTGCATGAC CTGATCAATA CAATCATCAT CGGTTTCTTA CTGGTAACAT TGATCCTCAT GTTCTTCATG GGTGCAGTGA ACGCGATCTT CGTGGCATTA TCCGTACCGA TCTCAATGTT TATTGCATTC CTGCTGATGC CAATGTATGA TTTCACCCTG AATATGATGG TGTTGTTCTC ATTCCTGCTG GCATTAGGTA TTGTAGTGGA TGATGCGATC GTGGTGATAG AAAACGTGCA CCGTATATTT TATGAAAGGA AAGACCTGGG TATTGTGAAG GCTGCGAAAG TAGCAGCAGG AGAGGTGTTT CTGCCGGTGT TCTCCGGTAC GCTAACGGTA TTGGCGCCTT TCTTCCCGCT GTTGTTCTGG CCTGGTATCA TTGGTAGTTT CATGTTCTTC CTGCCGGTAA CGCTGATCAC GACATTGGGT GCATCATTGA TTGTGGCGTA TATTATCAAC CCGGTATTTG CGGTTGACTT TATGGATCGT CATGAAGGAG AAAATCATCC GAAGCCAACG TTCAACAGGA GTATGAAGAT CCTGACGATT GTGTTTGTGG TGATCGCATT GCTTGCATAT GTATCAGGTA GTAAAGGTGT AGGTAATTTC ACCCTCTTCG CACTGACGAT GATCATGCTG GAAAGGTTCT GGCTGGGTGG TGTTGCCCGT CGTTTCCAGA CGAATACATG GCCGCGTGTG CAGGAACGTT ATAGAAAGGT GCTGAAATGG TGTCTTGTAG GATGGCGTCC GGTATGGATC CTGATCAGCA CATTTGCATT GTTGCTATTC AGTATCATGC TGACTGTTGT GACCAGTCCG AAAGTCGTGT TCTTCCCACA GGCAGATCCG AACTTCATCT ATACATATAT TGAATTGCCG ATGGGTACGG ACCAGAAATA TACTGACTCC GTTACGCATA TCATTGAACA AAAAATTACG GCAGTAGTTG GTAAGAAGAA TCCTATTGTA GAATCTATCA TCTCCAACGT TGCAGTAGGC GCCGGCGATC CTTCACAGAT GGATATGAGT GTGCAGCCGC ACAAGGGTAA AGTGACTGTA GCATTCGTAG AGTTTGGTAA ACGTGACGGA CATTCTACTG TACAATACCT GGATAAGATC CGTAAGGCGG TAAGAGGTAT TCCTGGAGTG GATATTACTG TGGAGCAGGA GCAGGGTGGT CCTCCGACAG GTAAACCGAT CAACATCGAG ATTTCCGGAG ATGAATTTGA AGCACTGACT GCTACGGCTG ATAAAATGAA ACGTTACCTG GACAGTCTGG AGATTGGTGG CGTGGAAGAG CTGAAATCAG ACTTCCAGAG CAACAAGCCT GAGATCCTGG TGAACATTGA CCGTGAAAGA GCAAACAGGG AAGGTATCAG TACGACCACC ATCGGTATGG CCTTACGTAC AGCACTGTAC GGACAGGAAG CTTCCAAGTT CCGTGATCCG GAAGACGACT ATAAGATAAT GGTGCGTTTC CGCGAGGATC AGCGTAACAA TATCAATACC CTGATGAACC TGAATATTGT GTACCGTGAT ATGAATATGA ACGGTACGAT CCGTCAGGTG CCATTATCGG CGGTAGCTAC GATTAAGTAT TCTAACACAT ACGCAAGTAT CAAACGTATT GATCAGAAGC GTGTTGTAAC CTTATACTCA AATGTATTGA CAGGTTTCAA CACAAATGAG GTGGTGCAGC AGATACAGAC AGCAATACAG GACTTCCCTA AGACGCCGGG TATCAGTGTA AAAATGACGG GTGAGCAGGA AGATCAGCAG GAGACTTCTA ACTTCCTGGG TATGGCGATG CTGGGTGCTT TTGGTCTGAT TCTGATGATC ATGGTGACAC AGTTTAACTC TATTGGTCGT CCGCTGGTTA TTTTTATGGA AATATTATTC TCCATTATAG GGGTATTCCT CGGTTTTGCC ATCTTTGGTA TGGACATCTC TATTGTAATG ACCGGTGTAG GTATTATGGC GCTGGCGGGT ATCGTTGTAC GTAACGGTAT CGTACTGGTT GAATTTACTG ATCTGCTGAT ACAGCAGAAG ATGCCTGTAT ATGAAGCGGT GATTGAGGCG GGAAGAACCC GTATGACCCC TGTGTTACTG ACAGCGATAG CGGCCATTCT GGGTCTGATA CCCCTGGCAG TAGGATTTAA CATCGACTTT GCCGGACTGT TCTCTTCCTT TGAGCCTCAT ATCTTCTTCG GAGGTGATAA CGTGGCTTTC TGGGGACCGC TGGCCTGGAC GATGGTATAC GGACTGGTGT TTGCGACCTT CCTGACATTG ATCCTGGTAC CGGTAATGTA TGCAATGAAT AAACGTTCCA TCGACGTACT GGACCGTTAC GGACTGGCAA GAAATCTGAA ATATGTGCCT TTCCTGGTGC TGATATTGAA ACTCTTTATG AAGAAAGAGG AAGTGCGGAA AATGCATGAT CCGGCTTATA TGTCGCCTAA ACCTTATAAT TTCTTCCCGA GCGGGGAGGA GCATGAGGGA GAGGTAGCCG AAACACACAC TAATCATACA CATCATCAAG ATAAGAAGAT GCATGAAAGA GTTTAG
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Protein sequence | MQDNLNKEFK PTSWSIDNKV SIYVATIILA LAGIMSYQSL PKEQFPEVVF PQFYISTIYS GTSPEDMETL VTKPIEKQLG GISGVKSIKS TSMQDYSAIT IEFDASENME TARQEVREKV DDAKKDLPND LTQEPQIIKI DVSQIPIMNV NLSGDFDLQS LKKYADEMQD RIEALNEITR VDIVGALERE IQINVDKYKM DAAKITFDDV ANAIAMENRT ISGGLVSMDG QKRTLSVKGE YKDANKIRDI VVRGMSGATV YLKDVAEVVD GFEEQESYAR LDGKNVITLN VIKQSGKNLI DASDKIRVII DEMKADYLPA GLDVTVTADQ SNSTRVTLHD LINTIIIGFL LVTLILMFFM GAVNAIFVAL SVPISMFIAF LLMPMYDFTL NMMVLFSFLL ALGIVVDDAI VVIENVHRIF YERKDLGIVK AAKVAAGEVF LPVFSGTLTV LAPFFPLLFW PGIIGSFMFF LPVTLITTLG ASLIVAYIIN PVFAVDFMDR HEGENHPKPT FNRSMKILTI VFVVIALLAY VSGSKGVGNF TLFALTMIML ERFWLGGVAR RFQTNTWPRV QERYRKVLKW CLVGWRPVWI LISTFALLLF SIMLTVVTSP KVVFFPQADP NFIYTYIELP MGTDQKYTDS VTHIIEQKIT AVVGKKNPIV ESIISNVAVG AGDPSQMDMS VQPHKGKVTV AFVEFGKRDG HSTVQYLDKI RKAVRGIPGV DITVEQEQGG PPTGKPINIE ISGDEFEALT ATADKMKRYL DSLEIGGVEE LKSDFQSNKP EILVNIDRER ANREGISTTT IGMALRTALY GQEASKFRDP EDDYKIMVRF REDQRNNINT LMNLNIVYRD MNMNGTIRQV PLSAVATIKY SNTYASIKRI DQKRVVTLYS NVLTGFNTNE VVQQIQTAIQ DFPKTPGISV KMTGEQEDQQ ETSNFLGMAM LGAFGLILMI MVTQFNSIGR PLVIFMEILF SIIGVFLGFA IFGMDISIVM TGVGIMALAG IVVRNGIVLV EFTDLLIQQK MPVYEAVIEA GRTRMTPVLL TAIAAILGLI PLAVGFNIDF AGLFSSFEPH IFFGGDNVAF WGPLAWTMVY GLVFATFLTL ILVPVMYAMN KRSIDVLDRY GLARNLKYVP FLVLILKLFM KKEEVRKMHD PAYMSPKPYN FFPSGEEHEG EVAETHTNHT HHQDKKMHER V
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