Gene Cpin_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1145 
Symbol 
ID8357261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1366424 
End bp1369999 
Gene Length3576 bp 
Protein Length1191 aa 
Translation table11 
GC content46% 
IMG OID644963301 
Productacriflavin resistance protein 
Protein accessionYP_003120844 
Protein GI256420191 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000258261 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.148502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA ACCTGAATAA AGAATTTAAA CCTACCAGCT GGTCCATTGA TAATAAGGTA 
AGCATTTATG TGGCTACCAT TATCCTGGCC CTCGCAGGTA TTATGTCCTA TCAGAGCCTG
CCGAAGGAAC AGTTTCCGGA AGTAGTGTTT CCTCAGTTCT ATATCAGCAC CATTTACAGC
GGTACTTCTC CGGAAGACAT GGAGACGTTG GTGACGAAAC CTATAGAAAA ACAATTGGGT
GGTATTTCCG GTGTGAAGTC TATCAAGAGT ACTTCCATGC AGGACTATTC TGCCATCACG
ATAGAATTTG ACGCGAGTGA GAATATGGAA ACTGCGCGGC AGGAAGTACG TGAGAAAGTA
GATGATGCGA AGAAAGATCT GCCAAACGAC CTTACACAGG AACCACAGAT CATCAAGATA
GACGTATCGC AGATACCTAT CATGAACGTG AACCTGTCAG GTGATTTTGA TCTGCAGTCA
CTGAAGAAGT ATGCAGATGA AATGCAGGAC CGCATCGAGG CGTTGAATGA AATTACCCGT
GTGGATATTG TCGGCGCATT GGAAAGAGAG ATCCAGATCA ACGTCGATAA ATACAAAATG
GACGCGGCGA AGATCACCTT TGACGACGTA GCTAATGCGA TCGCGATGGA AAACCGCACC
ATCTCCGGTG GTCTGGTTTC TATGGATGGA CAGAAGCGTA CATTGAGTGT GAAAGGTGAA
TACAAAGATG CTAATAAGAT ACGCGATATC GTTGTACGTG GTATGTCAGG TGCAACGGTA
TACCTGAAAG ATGTAGCAGA AGTAGTAGAC GGTTTTGAAG AGCAGGAAAG TTACGCGCGT
CTGGATGGCA AGAATGTAAT CACCCTCAAC GTGATCAAAC AGAGCGGTAA AAACCTGATC
GACGCATCCG ATAAGATCCG TGTTATCATT GATGAAATGA AGGCAGATTA TCTGCCTGCG
GGACTGGATG TAACTGTTAC TGCTGATCAG TCCAACTCTA CGCGTGTAAC GCTGCATGAC
CTGATCAATA CAATCATCAT CGGTTTCTTA CTGGTAACAT TGATCCTCAT GTTCTTCATG
GGTGCAGTGA ACGCGATCTT CGTGGCATTA TCCGTACCGA TCTCAATGTT TATTGCATTC
CTGCTGATGC CAATGTATGA TTTCACCCTG AATATGATGG TGTTGTTCTC ATTCCTGCTG
GCATTAGGTA TTGTAGTGGA TGATGCGATC GTGGTGATAG AAAACGTGCA CCGTATATTT
TATGAAAGGA AAGACCTGGG TATTGTGAAG GCTGCGAAAG TAGCAGCAGG AGAGGTGTTT
CTGCCGGTGT TCTCCGGTAC GCTAACGGTA TTGGCGCCTT TCTTCCCGCT GTTGTTCTGG
CCTGGTATCA TTGGTAGTTT CATGTTCTTC CTGCCGGTAA CGCTGATCAC GACATTGGGT
GCATCATTGA TTGTGGCGTA TATTATCAAC CCGGTATTTG CGGTTGACTT TATGGATCGT
CATGAAGGAG AAAATCATCC GAAGCCAACG TTCAACAGGA GTATGAAGAT CCTGACGATT
GTGTTTGTGG TGATCGCATT GCTTGCATAT GTATCAGGTA GTAAAGGTGT AGGTAATTTC
ACCCTCTTCG CACTGACGAT GATCATGCTG GAAAGGTTCT GGCTGGGTGG TGTTGCCCGT
CGTTTCCAGA CGAATACATG GCCGCGTGTG CAGGAACGTT ATAGAAAGGT GCTGAAATGG
TGTCTTGTAG GATGGCGTCC GGTATGGATC CTGATCAGCA CATTTGCATT GTTGCTATTC
AGTATCATGC TGACTGTTGT GACCAGTCCG AAAGTCGTGT TCTTCCCACA GGCAGATCCG
AACTTCATCT ATACATATAT TGAATTGCCG ATGGGTACGG ACCAGAAATA TACTGACTCC
GTTACGCATA TCATTGAACA AAAAATTACG GCAGTAGTTG GTAAGAAGAA TCCTATTGTA
GAATCTATCA TCTCCAACGT TGCAGTAGGC GCCGGCGATC CTTCACAGAT GGATATGAGT
GTGCAGCCGC ACAAGGGTAA AGTGACTGTA GCATTCGTAG AGTTTGGTAA ACGTGACGGA
CATTCTACTG TACAATACCT GGATAAGATC CGTAAGGCGG TAAGAGGTAT TCCTGGAGTG
GATATTACTG TGGAGCAGGA GCAGGGTGGT CCTCCGACAG GTAAACCGAT CAACATCGAG
ATTTCCGGAG ATGAATTTGA AGCACTGACT GCTACGGCTG ATAAAATGAA ACGTTACCTG
GACAGTCTGG AGATTGGTGG CGTGGAAGAG CTGAAATCAG ACTTCCAGAG CAACAAGCCT
GAGATCCTGG TGAACATTGA CCGTGAAAGA GCAAACAGGG AAGGTATCAG TACGACCACC
ATCGGTATGG CCTTACGTAC AGCACTGTAC GGACAGGAAG CTTCCAAGTT CCGTGATCCG
GAAGACGACT ATAAGATAAT GGTGCGTTTC CGCGAGGATC AGCGTAACAA TATCAATACC
CTGATGAACC TGAATATTGT GTACCGTGAT ATGAATATGA ACGGTACGAT CCGTCAGGTG
CCATTATCGG CGGTAGCTAC GATTAAGTAT TCTAACACAT ACGCAAGTAT CAAACGTATT
GATCAGAAGC GTGTTGTAAC CTTATACTCA AATGTATTGA CAGGTTTCAA CACAAATGAG
GTGGTGCAGC AGATACAGAC AGCAATACAG GACTTCCCTA AGACGCCGGG TATCAGTGTA
AAAATGACGG GTGAGCAGGA AGATCAGCAG GAGACTTCTA ACTTCCTGGG TATGGCGATG
CTGGGTGCTT TTGGTCTGAT TCTGATGATC ATGGTGACAC AGTTTAACTC TATTGGTCGT
CCGCTGGTTA TTTTTATGGA AATATTATTC TCCATTATAG GGGTATTCCT CGGTTTTGCC
ATCTTTGGTA TGGACATCTC TATTGTAATG ACCGGTGTAG GTATTATGGC GCTGGCGGGT
ATCGTTGTAC GTAACGGTAT CGTACTGGTT GAATTTACTG ATCTGCTGAT ACAGCAGAAG
ATGCCTGTAT ATGAAGCGGT GATTGAGGCG GGAAGAACCC GTATGACCCC TGTGTTACTG
ACAGCGATAG CGGCCATTCT GGGTCTGATA CCCCTGGCAG TAGGATTTAA CATCGACTTT
GCCGGACTGT TCTCTTCCTT TGAGCCTCAT ATCTTCTTCG GAGGTGATAA CGTGGCTTTC
TGGGGACCGC TGGCCTGGAC GATGGTATAC GGACTGGTGT TTGCGACCTT CCTGACATTG
ATCCTGGTAC CGGTAATGTA TGCAATGAAT AAACGTTCCA TCGACGTACT GGACCGTTAC
GGACTGGCAA GAAATCTGAA ATATGTGCCT TTCCTGGTGC TGATATTGAA ACTCTTTATG
AAGAAAGAGG AAGTGCGGAA AATGCATGAT CCGGCTTATA TGTCGCCTAA ACCTTATAAT
TTCTTCCCGA GCGGGGAGGA GCATGAGGGA GAGGTAGCCG AAACACACAC TAATCATACA
CATCATCAAG ATAAGAAGAT GCATGAAAGA GTTTAG
 
Protein sequence
MQDNLNKEFK PTSWSIDNKV SIYVATIILA LAGIMSYQSL PKEQFPEVVF PQFYISTIYS 
GTSPEDMETL VTKPIEKQLG GISGVKSIKS TSMQDYSAIT IEFDASENME TARQEVREKV
DDAKKDLPND LTQEPQIIKI DVSQIPIMNV NLSGDFDLQS LKKYADEMQD RIEALNEITR
VDIVGALERE IQINVDKYKM DAAKITFDDV ANAIAMENRT ISGGLVSMDG QKRTLSVKGE
YKDANKIRDI VVRGMSGATV YLKDVAEVVD GFEEQESYAR LDGKNVITLN VIKQSGKNLI
DASDKIRVII DEMKADYLPA GLDVTVTADQ SNSTRVTLHD LINTIIIGFL LVTLILMFFM
GAVNAIFVAL SVPISMFIAF LLMPMYDFTL NMMVLFSFLL ALGIVVDDAI VVIENVHRIF
YERKDLGIVK AAKVAAGEVF LPVFSGTLTV LAPFFPLLFW PGIIGSFMFF LPVTLITTLG
ASLIVAYIIN PVFAVDFMDR HEGENHPKPT FNRSMKILTI VFVVIALLAY VSGSKGVGNF
TLFALTMIML ERFWLGGVAR RFQTNTWPRV QERYRKVLKW CLVGWRPVWI LISTFALLLF
SIMLTVVTSP KVVFFPQADP NFIYTYIELP MGTDQKYTDS VTHIIEQKIT AVVGKKNPIV
ESIISNVAVG AGDPSQMDMS VQPHKGKVTV AFVEFGKRDG HSTVQYLDKI RKAVRGIPGV
DITVEQEQGG PPTGKPINIE ISGDEFEALT ATADKMKRYL DSLEIGGVEE LKSDFQSNKP
EILVNIDRER ANREGISTTT IGMALRTALY GQEASKFRDP EDDYKIMVRF REDQRNNINT
LMNLNIVYRD MNMNGTIRQV PLSAVATIKY SNTYASIKRI DQKRVVTLYS NVLTGFNTNE
VVQQIQTAIQ DFPKTPGISV KMTGEQEDQQ ETSNFLGMAM LGAFGLILMI MVTQFNSIGR
PLVIFMEILF SIIGVFLGFA IFGMDISIVM TGVGIMALAG IVVRNGIVLV EFTDLLIQQK
MPVYEAVIEA GRTRMTPVLL TAIAAILGLI PLAVGFNIDF AGLFSSFEPH IFFGGDNVAF
WGPLAWTMVY GLVFATFLTL ILVPVMYAMN KRSIDVLDRY GLARNLKYVP FLVLILKLFM
KKEEVRKMHD PAYMSPKPYN FFPSGEEHEG EVAETHTNHT HHQDKKMHER V