Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1107 |
Symbol | |
ID | 8357221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1326336 |
End bp | 1326827 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644963261 |
Product | protein of unknown function DUF1486 |
Protein accession | YP_003120806 |
Protein GI | 256420153 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TAGTAATCCT GTCGGCTGTA ATAGTAATGC CTTTATTATC AGCAGCACAG ACATTAAAAC AAACGGAGCT TATCATGAAT AACAAAGCAG TAGTCAGTAA AATGTATGAA GCCGTCCTTA ATAAAAGGGA TATCTCCAAT GTATCTCGGT TCGTTTCAGA TGCCTATCCG GGTACATTCG GACAGCAATT ACAACCATTG TTAGCGGCCT TTCCGGACGC GCAATGGGTA ATTAAAGATA TGGTGGCCGA AGGTAATAAA GTGGTTGTAT TCCAGGAATT TCAGGGTACG CACAAAGGAA CCTATCAACG CATTCCGGCT ACAGGGAAAT ATGTGACAGG GCCGGGTATC GTAAAATACG AAATGAAAGA CGGAAAGATT ATCAGTAGCG CTGTATTAAC GGATCGGCTG GGCTTTCTGG AGGCATTAGG TGTAATGATC CCTACCGATA ATAGCGGCAA TCCTGCCATT AACAACAAAT AA
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Protein sequence | MKFLVILSAV IVMPLLSAAQ TLKQTELIMN NKAVVSKMYE AVLNKRDISN VSRFVSDAYP GTFGQQLQPL LAAFPDAQWV IKDMVAEGNK VVVFQEFQGT HKGTYQRIPA TGKYVTGPGI VKYEMKDGKI ISSAVLTDRL GFLEALGVMI PTDNSGNPAI NNK
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