Gene Cpin_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1107 
Symbol 
ID8357221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1326336 
End bp1326827 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID644963261 
Productprotein of unknown function DUF1486 
Protein accessionYP_003120806 
Protein GI256420153 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TAGTAATCCT GTCGGCTGTA ATAGTAATGC CTTTATTATC AGCAGCACAG 
ACATTAAAAC AAACGGAGCT TATCATGAAT AACAAAGCAG TAGTCAGTAA AATGTATGAA
GCCGTCCTTA ATAAAAGGGA TATCTCCAAT GTATCTCGGT TCGTTTCAGA TGCCTATCCG
GGTACATTCG GACAGCAATT ACAACCATTG TTAGCGGCCT TTCCGGACGC GCAATGGGTA
ATTAAAGATA TGGTGGCCGA AGGTAATAAA GTGGTTGTAT TCCAGGAATT TCAGGGTACG
CACAAAGGAA CCTATCAACG CATTCCGGCT ACAGGGAAAT ATGTGACAGG GCCGGGTATC
GTAAAATACG AAATGAAAGA CGGAAAGATT ATCAGTAGCG CTGTATTAAC GGATCGGCTG
GGCTTTCTGG AGGCATTAGG TGTAATGATC CCTACCGATA ATAGCGGCAA TCCTGCCATT
AACAACAAAT AA
 
Protein sequence
MKFLVILSAV IVMPLLSAAQ TLKQTELIMN NKAVVSKMYE AVLNKRDISN VSRFVSDAYP 
GTFGQQLQPL LAAFPDAQWV IKDMVAEGNK VVVFQEFQGT HKGTYQRIPA TGKYVTGPGI
VKYEMKDGKI ISSAVLTDRL GFLEALGVMI PTDNSGNPAI NNK