Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1089 |
Symbol | |
ID | 8357203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1305930 |
End bp | 1307108 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644963243 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003120788 |
Protein GI | 256420135 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAAA AGAAAAGAAA ATGTTTGCTT TTGCTTACGA GAATTCCCTA TCCGCCGGTA GGAGGAGATA AGTTGAAAAG CTACCACCTC ATCAAAATCC TTAATAAACA TTACGACCTT AACGTAATCG TCATAACGGA TGAAAGCGCA GATAATGCTG ATGCGAATCA GTTCCTCAGT ACGCATTCCG CAGCATATAA GATCTTCTCT TTTCCTAAAC ACAGGTTTTA TATTAATGCA TTGGCAGGCT TGCTGGGGAA AGAACCAATA CAGGTAGCAT ACTATTACTT CAGAGAAGTA AAGAAGTATA TAGATGGTTT ATTGCCGCAA ACGGATTTTA TTATTGCAAA TCTGATCAGG ACTGTCAAAT ACATAGAGTA TACAGATAAG CCGAAGTTTC TTGACATCGT AGATTCCATT GCGATCAATT ATAAAAACGC CATAGATAAG GTTTCTTCTG TATTCTGGAA GAGCATTTAT AAAGTAGAGA TACCGCGGAT CACTGCCATT GAGGAACGAT CTATCAGAAC TTTTAATGCT ACGTTCTTTG TAAACAAGCA GGAGTCGGAA CACTGGGCAC AAACAGGAAA AGTGCGTTGG ATCCCTAATG GTGTAAATCC GAAATTGTAC GATTATTCGA AAACGAATCC GCAATACCGA AATGCCATTG TCTTTTTTGG GAAAATGGAT TACCAGCCGA ATATTGACGC TGTAACCTGG TATCTGAAGA ATGTACATAG CCTTATTAGC CCTGATCTGG TGTTTTACAT CGTAGGGGTT CATCCGGCGC CAGCTGTCAT TAAACTGGCT GAAAAGAATA AAAATGTAAT AGTGACTGGC TTTATTGAAG ACCCGTATGA AATCATCAAT TCGGCCAGGG CTGTGATTGC ACCTATGCAG ACAGGAGCTG GTATTCAGAA TAAAATCCTT GAGTCCATGG CTTTGGGGAA AGTAGTGGTG GCCACTTCAC TGGCAGCGAG ACCCATTGTA GGTGCGCGGG ATGGCGAAGA TCTGTTAGTG TCAGATGATC CGGTGCAGTT TGCAGGTTAC CTGAATGAGT TGGGCCAGGA TAATCATCCA TACGCGAAGG TGGCTGCAAA TGCCAAAATA TTGATGCAGA ATTATACCTG GGAACGTTAT GAGAAAACAT TAACAGCACT TATCGGTGAG GAGCTTTAA
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Protein sequence | MIEKKRKCLL LLTRIPYPPV GGDKLKSYHL IKILNKHYDL NVIVITDESA DNADANQFLS THSAAYKIFS FPKHRFYINA LAGLLGKEPI QVAYYYFREV KKYIDGLLPQ TDFIIANLIR TVKYIEYTDK PKFLDIVDSI AINYKNAIDK VSSVFWKSIY KVEIPRITAI EERSIRTFNA TFFVNKQESE HWAQTGKVRW IPNGVNPKLY DYSKTNPQYR NAIVFFGKMD YQPNIDAVTW YLKNVHSLIS PDLVFYIVGV HPAPAVIKLA EKNKNVIVTG FIEDPYEIIN SARAVIAPMQ TGAGIQNKIL ESMALGKVVV ATSLAARPIV GARDGEDLLV SDDPVQFAGY LNELGQDNHP YAKVAANAKI LMQNYTWERY EKTLTALIGE EL
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