| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1058 |
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| Symbol | |
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| ID | 8357172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1264861 |
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| End bp | 1266528 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963212 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003120757 |
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| Protein GI | 256420104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCAT TTTTTCGCAG AAATAGAAGA ATGATGCTGG TATTGGTGCT GCTGGTGGCC
GGCGGTATGA GTATCATGGC TTATAATGAG AAGGATAAGT ACTTCGAAAT AGCCAAGAAT
CTTGACATAT TCGCCGCCTT TTACCGCGAA CTCAATACCT ACTACGTAGA TGAATTGCCT
CCCGAAAAAC TCATGCATAA AGGCATTGAC GCCATGCTGG AAGAGACAGA CCCTTACACT
GATTTCATAC CGGAAGAAAA CCTGGATGAA CTAAAGTTTA TGGCCACCGG TAAATACGGT
GGAGTAGGGG TGTCCGTCAA TACCGACAGC GAACGCACCG TTATCACCGA CGTATACGAA
GGCGGTCCGA TGGATAAAGC CGGTGTGAAA CCTGGCGATA TCATTCTCTC ACTTGATGGG
AAGGATATCA AAGGACTGGA CCAGGAGGAG ATCAGCCGTA TGCTGAAAGG TGCTCCGGGC
TCTTCCCTGG ATATGATCAC CAAACATCCT GTTACCGGTG CACAGAACAC CAGGAAGATT
AATCGGGAAG AAATCAATGT GAAAGCTGTC AGCTTCTCCG GTATCACCAA CCGCGATATC
GGGTATATCA GGATGACACA GTTCACCGAA AACAGCGGGG AACTGGTACA AGGGGCTTTC
GCAGAACTTA AAAAGCAATA TCCTTCCATG AAAGGGCTGA TACTGGACCT CAGAGGTAAC
CCGGGTGGTT TACTCGATGA AGCAGTGGTA GTGGCCAATA TCTTCGTGGA TAAGAATAAA
ACGATTGTTA GCACCAAAGG AAAAGTAAAG AGCTGGGACA GGGAATATAA AACCGAAACA
TCCGCATTCG ATGCACATAT CCCCCTGGTC GTACTGACCA ACCGCTCCTC GGCTTCCGCT
TCAGAAATCG TGGCAGGCGC TATTCAGGAC CTCGATAGGG GCGTAATTAT CGGTCAGCGT
TCCTTTGGTA AGGGATTAGT GCAAACCACG CGTCCGCTGC CTTATAATGC GAAACTGAAA
GTGACCACCG CGAAATACTA CACACCAAGC GGTCGCTGTA TCCAGGCCAT TGACTATTCC
CACAGAAACA GCGATGGTGA GGTGGAATAT GTAGCCGATT CTGTGCGTAA ATCCTTTAAT
ACTGTAGCTG GCCGTAAAGT AAGAGATGGC GGTGGCATAG AACCAGATGA TGCAGTAGAA
CCAACCCTGC TCAGCCAGGT AGCTATCACC CTGTTGCGTA AACAATACAT CTTTGATTTC
GCTACCCAGT ATTACTACAG TCATCCGAAA ATTGCAGCTG CCAATACCTT CGAACTTAGT
GAAGACGATT TCTCCGATTT CCTGAAATAT CTCGATGGCA GAAACTACAG CTACAAAACC
CGTAGTGAAG AAGCCCTGGA ATCATTCCAG GCTACCGCCA GAAAAGAGAA ATACTATGAG
GCAGTAGCAA AAGAGTTTGA AGCGCTGCAG GTCAAAATGA AACATGATAA GAAACAGGAC
CTGCTGAAGA ATAAAACAGA AATCAAACGG TTACTGGAAG AAGAGATCGC CAGCCGTTAC
TATATGCAGC GTGGTCGTAT TGAAAAATCA CTTTCCAGTG ATAATGAAGT CAATGAGGCG
ATTGCCGTAC TGCATTCACC GGAACGTTAT CAGCAGTTAC TGAAATAA
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| Protein sequence | MRAFFRRNRR MMLVLVLLVA GGMSIMAYNE KDKYFEIAKN LDIFAAFYRE LNTYYVDELP
PEKLMHKGID AMLEETDPYT DFIPEENLDE LKFMATGKYG GVGVSVNTDS ERTVITDVYE
GGPMDKAGVK PGDIILSLDG KDIKGLDQEE ISRMLKGAPG SSLDMITKHP VTGAQNTRKI
NREEINVKAV SFSGITNRDI GYIRMTQFTE NSGELVQGAF AELKKQYPSM KGLILDLRGN
PGGLLDEAVV VANIFVDKNK TIVSTKGKVK SWDREYKTET SAFDAHIPLV VLTNRSSASA
SEIVAGAIQD LDRGVIIGQR SFGKGLVQTT RPLPYNAKLK VTTAKYYTPS GRCIQAIDYS
HRNSDGEVEY VADSVRKSFN TVAGRKVRDG GGIEPDDAVE PTLLSQVAIT LLRKQYIFDF
ATQYYYSHPK IAAANTFELS EDDFSDFLKY LDGRNYSYKT RSEEALESFQ ATARKEKYYE
AVAKEFEALQ VKMKHDKKQD LLKNKTEIKR LLEEEIASRY YMQRGRIEKS LSSDNEVNEA
IAVLHSPERY QQLLK
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