| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1029 |
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| Symbol | |
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| ID | 8357143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1233549 |
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| End bp | 1235081 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963183 |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003120728 |
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| Protein GI | 256420075 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00063016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTT TAGGTAATCT TATATCCAGG TCACTGCGCA TCAGGAAGAA ATTCACATTT
AAGTTAGGGA CGCCCCGCCA ATACCAACTA CAGGTATTAA GGAGATTGCT GGGGAAGGCG
AAGGACACGC AGTTTGGACA GCATTACAAA TTCCAGGAAA TCCTGAACAG TCCCAATATC
ACGGCTCAGT ACCGTTCTAC CATACCGGTG CATAACTATA ACAAGATGCA CGCTGAATGG
TGGCATAAGT GTCTGGAAGG ACAGGCAAAC GTGAGCTGGC CTGAAAAAAT CAAATACTTC
GCGCTGAGCT CCGGTACATC GGAGTCGGCC AGTAAACATA TTCCGGTTAC CAAGGATATG
CTGAAAAACG TCAAGAAAGT GGGCGTAAAG CAGCTTTATT CCATGGCGAA CTTCAATATT
CCCCCTAAGT CCTTTACGAA AGGTATCCTG ATGTTGGGTG GTACTACTGC CCTTTATGAG
AAAGGTGACT ACTACGAAGG AGATATGAGC GGTATCCAGG CGAAGAACAT TCCGCGCTGG
TTCAGACGTT TCTATAAGCC GGGAGGTAAT ATCTCCAGGA AGCCAAACTG GGAGCAGCGT
ATCAAGCTGA TCGTTCGTAA GGCGAAACAA TGGGACGTAG GAACAGTATG TGGTGTGCCT
GCATGGGTGC AGATCGTATT AGCCGAGATC ATCAAGTATC ACGGTGTAAA GAACATTCAC
GAAATATGGC CGAACCTGGC TGTATATATT CATGGCGGGG TATCTTTCGA ACCTTACCGT
GACAGCTTCC AGAAATTACT CGGTAAGCCG ATCAACTTCA TCGAAACTTA CATGGCCTCC
GAAGGTTCTT TCGGTTTCCA GGCAAGGCCA GGTGTACGTG GTATCAAGCT GGTGCTGAAT
ACGGGTATCT TCTATGAGTT TATTCCATTC AACGAAGAAA ACTTTACTGC TGATGGCGAA
GTGAAGCCTA ATCCAAAGGC TTACATGATC CATGAAGTAG TGGAAGATGT TGAGTATGCA
GTGATGCTGT CTACCTGTGC GGGTGCATGG CGTTACCTGA TCGGCGATGT GGTGAAGTTC
ACTTCCGTGA AAGAACATGA GATCGTCATT GTTGGTCGTA CGAAACAGTT CCTCAGTCTT
TGCGGAGAAC ACATGAGTAT CGACAACATG AACAAGGCGA TTGATATGGT GCAGAAGAAG
ATGGGTATTA CCATCAGAGA ATTCACCGTA GCAGGCTTCC CGTATGACGG ATTGTTTGCA
CACCGTTGGT ACATTGGTAC TGATGATGTG AATGTAGACA GTAACCGTGT ACGTGAGATC
ATCGATCAGA CACTGAGTGA AGTGAATGAC GATTACGCAG TGGAAAGAAC TTCCGCCCTG
AAAGAGCTGT TCGTAGAAGT ATTGCCGAAC GAAGTATTCA TTGACTATAT GAGAGCGAAA
GGTAAGGAAG GTGCGATGAA TAAGTTCCCG CGTGTAATGA AAGGCGACAA GCTGAAAGAC
TGGGAACAGT TCCTGAGCGT GAAGTCAGTT TAA
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| Protein sequence | MAILGNLISR SLRIRKKFTF KLGTPRQYQL QVLRRLLGKA KDTQFGQHYK FQEILNSPNI
TAQYRSTIPV HNYNKMHAEW WHKCLEGQAN VSWPEKIKYF ALSSGTSESA SKHIPVTKDM
LKNVKKVGVK QLYSMANFNI PPKSFTKGIL MLGGTTALYE KGDYYEGDMS GIQAKNIPRW
FRRFYKPGGN ISRKPNWEQR IKLIVRKAKQ WDVGTVCGVP AWVQIVLAEI IKYHGVKNIH
EIWPNLAVYI HGGVSFEPYR DSFQKLLGKP INFIETYMAS EGSFGFQARP GVRGIKLVLN
TGIFYEFIPF NEENFTADGE VKPNPKAYMI HEVVEDVEYA VMLSTCAGAW RYLIGDVVKF
TSVKEHEIVI VGRTKQFLSL CGEHMSIDNM NKAIDMVQKK MGITIREFTV AGFPYDGLFA
HRWYIGTDDV NVDSNRVREI IDQTLSEVND DYAVERTSAL KELFVEVLPN EVFIDYMRAK
GKEGAMNKFP RVMKGDKLKD WEQFLSVKSV
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