Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1028 |
Symbol | |
ID | 8357142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1232618 |
End bp | 1233427 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963182 |
Product | inositol monophosphatase |
Protein accession | YP_003120727 |
Protein GI | 256420074 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00157763 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAGAA AAAAAATTCC CGCGTACCTT TGCCCCATGT TAAAAGCTAC CCTACTCAAA GCAACAAAAG CCGGCGGAGA TGTTCTACAG CAATACTTTA ACGGCTCTTT TGAGGTCACC AGCAAAAGTT CAGTAAATGA CCTCGTTACC GAAGCCGATA AGAATGCAGA AACGGCGATT TTCAGTGTGA TCAGGGAACA CTTTCCCCAG CACTTTATCC TGAGCGAAGA ATCCGGAGAA CTGGTCTCTG ACTCCAATGT CAAGTGGATC ATCGACCCCC TGGATGGTAC GGTTAACTTT GCACATGGTA TTCCGATCTG CTGCGTGTCT ATCGGCGTAG AGCAGGACGG TGAAATGATC CTCGGGGCTG TTTACAACCC ATTCCTGAAC GAGTTCTTCT TTGCCGAAAA AGGACAGGGC GCTTACCTGA ATGACAAACG CATCCGCGTA TCCGCAAAAA CAGAAATGAA TAAAGCCTGC ATGGTAACCG GTTTTCCGTA TACCTGGGGT GAATATACTC ATAGCCCGAT CGAAGTGTTT GAGTACTTCG TAAAGCAAGG TCAGCCGGTA CGCCGCCTCG GTTCTGCCGC TATTGATCTC TGCTGGGTAG CTACCGGTCG CTTTGACGGT TATTACGAAC ACAGCCTCAA CGCCTGGGAC GCCGCTGCCG GCTTCCTGAT AGTAGAAGAA GCAGGTGGTA AAGTAACTGA CTTCAAAGGC AACCGCTACT CTCCCTACCA GCGTACGCTG ATAGCCACCA ATGGCCTTAT CCACGAGCCG CTGATAGATA TCGTTAACGG TAAATACTAA
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Protein sequence | MVRKKIPAYL CPMLKATLLK ATKAGGDVLQ QYFNGSFEVT SKSSVNDLVT EADKNAETAI FSVIREHFPQ HFILSEESGE LVSDSNVKWI IDPLDGTVNF AHGIPICCVS IGVEQDGEMI LGAVYNPFLN EFFFAEKGQG AYLNDKRIRV SAKTEMNKAC MVTGFPYTWG EYTHSPIEVF EYFVKQGQPV RRLGSAAIDL CWVATGRFDG YYEHSLNAWD AAAGFLIVEE AGGKVTDFKG NRYSPYQRTL IATNGLIHEP LIDIVNGKY
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