Gene Cpin_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1028 
Symbol 
ID8357142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1232618 
End bp1233427 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID644963182 
Productinositol monophosphatase 
Protein accessionYP_003120727 
Protein GI256420074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00157763 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGAA AAAAAATTCC CGCGTACCTT TGCCCCATGT TAAAAGCTAC CCTACTCAAA 
GCAACAAAAG CCGGCGGAGA TGTTCTACAG CAATACTTTA ACGGCTCTTT TGAGGTCACC
AGCAAAAGTT CAGTAAATGA CCTCGTTACC GAAGCCGATA AGAATGCAGA AACGGCGATT
TTCAGTGTGA TCAGGGAACA CTTTCCCCAG CACTTTATCC TGAGCGAAGA ATCCGGAGAA
CTGGTCTCTG ACTCCAATGT CAAGTGGATC ATCGACCCCC TGGATGGTAC GGTTAACTTT
GCACATGGTA TTCCGATCTG CTGCGTGTCT ATCGGCGTAG AGCAGGACGG TGAAATGATC
CTCGGGGCTG TTTACAACCC ATTCCTGAAC GAGTTCTTCT TTGCCGAAAA AGGACAGGGC
GCTTACCTGA ATGACAAACG CATCCGCGTA TCCGCAAAAA CAGAAATGAA TAAAGCCTGC
ATGGTAACCG GTTTTCCGTA TACCTGGGGT GAATATACTC ATAGCCCGAT CGAAGTGTTT
GAGTACTTCG TAAAGCAAGG TCAGCCGGTA CGCCGCCTCG GTTCTGCCGC TATTGATCTC
TGCTGGGTAG CTACCGGTCG CTTTGACGGT TATTACGAAC ACAGCCTCAA CGCCTGGGAC
GCCGCTGCCG GCTTCCTGAT AGTAGAAGAA GCAGGTGGTA AAGTAACTGA CTTCAAAGGC
AACCGCTACT CTCCCTACCA GCGTACGCTG ATAGCCACCA ATGGCCTTAT CCACGAGCCG
CTGATAGATA TCGTTAACGG TAAATACTAA
 
Protein sequence
MVRKKIPAYL CPMLKATLLK ATKAGGDVLQ QYFNGSFEVT SKSSVNDLVT EADKNAETAI 
FSVIREHFPQ HFILSEESGE LVSDSNVKWI IDPLDGTVNF AHGIPICCVS IGVEQDGEMI
LGAVYNPFLN EFFFAEKGQG AYLNDKRIRV SAKTEMNKAC MVTGFPYTWG EYTHSPIEVF
EYFVKQGQPV RRLGSAAIDL CWVATGRFDG YYEHSLNAWD AAAGFLIVEE AGGKVTDFKG
NRYSPYQRTL IATNGLIHEP LIDIVNGKY