Gene Cpin_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1024 
Symbol 
ID8357138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1228017 
End bp1228400 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID644963178 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_003120723 
Protein GI256420070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.808514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG GTCTACACCA TATAGCAATC ATTTGCTCTG ATTATGAAAA GAGCAAGCGT 
TTTTATACAG AAGTACTCGG TCTCAGGATC ATCCGCGAAG TATACCGGCT GGAACGCCGG
TCATACAAGC TGGACCTGGC ATTAAACGAG TATTATGTGA TTGAATTGTT TTCCTTTCCG
GATCCGCCGC AAAGAGTCAG CGGACCGGAA GCAGCAGGAT TAAGGCACCT GGCTTTCGCT
GTAGATAACC TGGAAAAGGC GATAGCGCAT CTTCAAACGT ACAATGTCAC TCCCGAGCCT
GTACGTACCG ATCCCTACAC TGGCAGACGG TTTACCTTTT TTACCGACCC TGACGGCTTA
CCTCTGGAAT TATATGAAGC GTAA
 
Protein sequence
MLKGLHHIAI ICSDYEKSKR FYTEVLGLRI IREVYRLERR SYKLDLALNE YYVIELFSFP 
DPPQRVSGPE AAGLRHLAFA VDNLEKAIAH LQTYNVTPEP VRTDPYTGRR FTFFTDPDGL
PLELYEA