Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1002 |
Symbol | |
ID | 8357116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1203980 |
End bp | 1204936 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963156 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_003120701 |
Protein GI | 256420048 |
COG category | [R] General function prediction only |
COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATAA CTCATTCCAT TCCGGTTGTG GACCTCGCCG CCTTCACCTC AGGCGACGCC GCCAGTAAAG CAGCTTTTGT GGAGCAGCTT GGTAAAGCTT ACGAAGAAGT AGGCTTTGTG GCGGTAAAAA ATCACGGTAT TTCTGACGAT CTTATTGCGA AACTGTACAA GTACGTACAA CTGTTTTTTA CCCTGCCGTC CGATATCAAG CGGTCTTATG AGATCCCTGA ACTGGCCGGC CAACGTGGCT ACACCTCCTT TGGGAAAGAA CACGCCAAGG GCTATGATGC GCCTGACCTG AAAGAATTCT TCCAGTTCGG CCAGACAGTA GAAGATGATG ACCCGATCGG TGCAGAATAC CCACCTAACG TGGCAGTAAA AGAAATCCCG GCATTTACGC CTACTTTCTT TGATGCCTAC CGTGGTTTTG AAACGTCAGG AAAAGCCCTG CTGCAGGCGA TTGCCATCTA CCTCGGACTG GACGAGTATT ACTTTGATCA GTTTATTCAT AACGGTAATT CCATCCTGAG GGCTATTCAC TACCCTCCTA TTACGGAAGA ACCATCTTCT GCCATCCGTG CAGAACAACA TGAGGACATC AACCTCATTA CCCTGCTGGT AGGCGCTTCC GCAGATGGAT TACAGATCCT GGACAAACAG AACAACTGGG TACCCGTAAC GTCATTGCCG GAACAGATCG TTGTAAACGT TGGCGATATG CTCCAACGCC TTACCAACAA TCGCCTGAAA TCAACTACAC ATCGCGTGGT AAACCCACCG CGTGAGATGT GGCATACCAG CCGTTATTCC ATTCCGTTCT TCCTGCATCC TAAATCTGAG ATGCCGCTGA ATGCACTGGA AAGCTGCGTA ACCGCGGAAC ATCCGCTCGC TTATGAGCCA ATCACCGCCG GCGAATACCT GGATGAACGC CTGAGAGAAA TCGGTCTTAA AAAATAG
|
Protein sequence | MAITHSIPVV DLAAFTSGDA ASKAAFVEQL GKAYEEVGFV AVKNHGISDD LIAKLYKYVQ LFFTLPSDIK RSYEIPELAG QRGYTSFGKE HAKGYDAPDL KEFFQFGQTV EDDDPIGAEY PPNVAVKEIP AFTPTFFDAY RGFETSGKAL LQAIAIYLGL DEYYFDQFIH NGNSILRAIH YPPITEEPSS AIRAEQHEDI NLITLLVGAS ADGLQILDKQ NNWVPVTSLP EQIVVNVGDM LQRLTNNRLK STTHRVVNPP REMWHTSRYS IPFFLHPKSE MPLNALESCV TAEHPLAYEP ITAGEYLDER LREIGLKK
|
| |