Gene Cpin_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1002 
Symbol 
ID8357116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1203980 
End bp1204936 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content50% 
IMG OID644963156 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003120701 
Protein GI256420048 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAA CTCATTCCAT TCCGGTTGTG GACCTCGCCG CCTTCACCTC AGGCGACGCC 
GCCAGTAAAG CAGCTTTTGT GGAGCAGCTT GGTAAAGCTT ACGAAGAAGT AGGCTTTGTG
GCGGTAAAAA ATCACGGTAT TTCTGACGAT CTTATTGCGA AACTGTACAA GTACGTACAA
CTGTTTTTTA CCCTGCCGTC CGATATCAAG CGGTCTTATG AGATCCCTGA ACTGGCCGGC
CAACGTGGCT ACACCTCCTT TGGGAAAGAA CACGCCAAGG GCTATGATGC GCCTGACCTG
AAAGAATTCT TCCAGTTCGG CCAGACAGTA GAAGATGATG ACCCGATCGG TGCAGAATAC
CCACCTAACG TGGCAGTAAA AGAAATCCCG GCATTTACGC CTACTTTCTT TGATGCCTAC
CGTGGTTTTG AAACGTCAGG AAAAGCCCTG CTGCAGGCGA TTGCCATCTA CCTCGGACTG
GACGAGTATT ACTTTGATCA GTTTATTCAT AACGGTAATT CCATCCTGAG GGCTATTCAC
TACCCTCCTA TTACGGAAGA ACCATCTTCT GCCATCCGTG CAGAACAACA TGAGGACATC
AACCTCATTA CCCTGCTGGT AGGCGCTTCC GCAGATGGAT TACAGATCCT GGACAAACAG
AACAACTGGG TACCCGTAAC GTCATTGCCG GAACAGATCG TTGTAAACGT TGGCGATATG
CTCCAACGCC TTACCAACAA TCGCCTGAAA TCAACTACAC ATCGCGTGGT AAACCCACCG
CGTGAGATGT GGCATACCAG CCGTTATTCC ATTCCGTTCT TCCTGCATCC TAAATCTGAG
ATGCCGCTGA ATGCACTGGA AAGCTGCGTA ACCGCGGAAC ATCCGCTCGC TTATGAGCCA
ATCACCGCCG GCGAATACCT GGATGAACGC CTGAGAGAAA TCGGTCTTAA AAAATAG
 
Protein sequence
MAITHSIPVV DLAAFTSGDA ASKAAFVEQL GKAYEEVGFV AVKNHGISDD LIAKLYKYVQ 
LFFTLPSDIK RSYEIPELAG QRGYTSFGKE HAKGYDAPDL KEFFQFGQTV EDDDPIGAEY
PPNVAVKEIP AFTPTFFDAY RGFETSGKAL LQAIAIYLGL DEYYFDQFIH NGNSILRAIH
YPPITEEPSS AIRAEQHEDI NLITLLVGAS ADGLQILDKQ NNWVPVTSLP EQIVVNVGDM
LQRLTNNRLK STTHRVVNPP REMWHTSRYS IPFFLHPKSE MPLNALESCV TAEHPLAYEP
ITAGEYLDER LREIGLKK