Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0961 |
Symbol | |
ID | 8357075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1152489 |
End bp | 1153151 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963115 |
Product | ABC transporter related |
Protein accession | YP_003120660 |
Protein GI | 256420007 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000589963 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.143962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAT TAAGACATAT CTCCAAGTAT TATCCCGTTG GATTTGGTAA GAATGAAATA TTAAAAGATA TTGATCTCAG AATTTTCGAA GGAGAGTTTG TATCTATAAT GGGCCCTTCC GGTTCAGGTA AATCCACCTT GTTACATATA ATGGGCTTGC TGGAAGAACC TAATCAGGGC GAATACCTGT TTGACGGAGA ACCGGTGCAT AAGATGAATG AGAAGAAACG TACCCAACTG CACCGGGGCG CCATAGGATT TGTTTTCCAG GCTTATCACC TGATTGATGA GCTGACGGTA TATGAAAACA TTGAGACACC ATTGCTATAT AAGAATGTTC CCGCTGCTGA ACGTAAGAGC CGTGTGGCTG ATATCCTGGA TCGTTTCAAT ATAGTAGCTA AAAAAGACCT TTTTCCTAGT CAGTTGTCCG GCGGACAACA ACAGCTGGTT GGTATAGCCC GTGCGCTGGT AGGCGAGCCT AAAGTGATCC TGGCTGATGA ACCAACCGGT AACCTGCATT CTGATCAGGC GAAGGAGATC ATGGAGCTGT TCAAGCAACT GAATGAAAAA GATAAGATTA CGATAGTACA GGTAACGCAT TCCGAAGTTA ATGCAGGTTA TGGTCACAGG ATCATACAGA TCCGTGACGG GAAAATCGCA TAA
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Protein sequence | MIQLRHISKY YPVGFGKNEI LKDIDLRIFE GEFVSIMGPS GSGKSTLLHI MGLLEEPNQG EYLFDGEPVH KMNEKKRTQL HRGAIGFVFQ AYHLIDELTV YENIETPLLY KNVPAAERKS RVADILDRFN IVAKKDLFPS QLSGGQQQLV GIARALVGEP KVILADEPTG NLHSDQAKEI MELFKQLNEK DKITIVQVTH SEVNAGYGHR IIQIRDGKIA
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