| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0926 |
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| Symbol | |
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| ID | 8357040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1105086 |
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| End bp | 1108313 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963080 |
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| Product | peptidase S41 |
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| Protein accession | YP_003120625 |
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| Protein GI | 256419972 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACACA GACCCGCTAC CCTGCTTATG CTGACAGGCC TTGCCTGCGC CATAGCTACA
GCGCAATCAA CAGAAACCCT GTTATTGCGC TCTCCGTCTA TCAGTCAGCA TCAGATTGCA
TTTAACTATG CAGGTGATAT CTGGACCACT GATGAAAATG GCCAACATCC ACAACGCATC
ACCGTCAACC CGGATGTCGA ACTTGAACCT ATGTTATCTC CGGATGGTAA ATGGATTGCC
TTTAGCGGTA ACTATGATGG CAATGTCGAT CTCTATGTCG TATCCGTCAA CGGCGGTATT
CCCCGTCGTA TCACCCACCA TCCCGATGCG GATATCGTAC GGGGCTGGCA TGGCAATGAC
AAGATCCTTT TTGCATCTAC ACGCAATTCC TTCTCCATGC GCTTCCAGCA ATTGTTTGAA
GTGAGCGTCA ACGGCGGTAT GCCGGTTAAA TTGAAAATGC CGGAAGCACA CCAGGGAAAT
ATCTCTCCTG ACGGATTGTA TACCGCTTAT ATCAAAAACC CCGATCCTAC TGAAAGATCT
GGTACCTATC GCCCCTTCAA ACATTATAGA GGCGGTAACA TGCCTAAGAT CTGGATATTC
AACAACCAGA CAAATACAGT CATCGAAATA CCGGATGCCG GCGCCAACAA CATCCGCCCC
GTATGGCTGG GTAACGATGT ATACTTCCTG AGCGACAGAA ACGGTACGAT GAACATCTTC
CGTTATTCCA TCTCCGGAAA GACCCTTACA CAGATCTCCA GTCATAAAGA CTACGATGTT
AAAACCCTGT TCTCTGATGG TAAAACACTG GTGTATGAAC AAGCTGGCAG GATCAACAAA
TGGGACGCTG CTTCCAATAA AAGCACGGCA TTAACAATCA GCCTGGAAGC AGACCTGCCC
TACAAAAGAC CTCATTATAT CAACGCTACT GTTGGCGCTC TCAGAAATGT CAACCTCTCA
CCTACCGGCG TGCGTGCTGC TGTAGAGTTT CGTGGCGACG TACTGACCGT TCCCGCAGAA
AAAGGTAACA TCCGTAACAT CACCGCTACC CCCGGTGTAC ATGAGCGTGC ACCTGTATGG
TCACCGGATG GCAAGTCCAT CGCCTACTTC TCTGATGCCG GTGGTGAATA TGCTTTACAT
ATCCGTGATC AGAAAGCAGA AAAGCCTGCA CAGATCATTC CGCTGGGCGA AACAAGCTTT
TTCTATAGTC CTTTGTGGTC GCCGGACAGC AAGAAAATAC TCTTTGCAGA TAAAAAATTA
CGCCTGTACT ATGTCGATAC AGAAAGCAAA AAAGTAACGC AGATCGACGA AGACAGTTAC
GATCGTCCGG ATCAGACGTT TAGTGCCAAC TGGAGTCCTG ATTCCCGCTG GATCACCTAC
AACAAGCGTT TACCGAATAG TCTGCAGGCA GTATTCCTCT ACAATATTGC TGATAAAAAA
AGCACTCAGG CAACAGATGG CCGTAGTGAA GCAGCAGAAC CTGTCTTCAG TAAAAATGGC
AAATACATCT TCTTTATCGC GAGTACCAAC TATGCACAGA ATACCGGCTG GCTGGACATG
ACGTCCTACG AACACCCTGT CCGCAGTAGT ATCTATGCGA TCGTACTCTC TGCCAATGCA
CCTTCTCTGC TGGCACCTGA AAGCGATGAT GAACAGGAGA AGAATGAAAA AGAGGAGAAA
TCAGATGCAA AATCAGATAC AAAAGATTCT TCGAAAACAC AGACTGCTAT TGACCTTGCG
AATATTGATC AGCGTATTGT TGCATTGCCT TTACCTGCTG ATGAATATTC ACAGCTGAAC
GGACTTGTTG CCAACAAACT CCTGTATCGT TCCGGCAATA CACTATACAG CTACGATATT
ACCAAACGTA AAAGCGATGT GCTGATGAGC GGCATCGATG GTTATACAGT CAGCCAGAAC
GGAGAAAAGC TGTTGTATAT GGCATCAGGC TCCTGTGGTA TCGTTGGCAC CGGTAGTAAA
GCAAATGCAG GCGAAGGAAC ATTGCAGATA AGTAACGTTC GCACACTCGT AGATCCTGCT
GCTGAGTGGC CACAGATGTT TGATGAACTC TGGCGTATTG AAAGAGATTT CTTTTATGTT
GATAATATGC ATGGCGCCGA CTGGAAAGCC ATAAAAAAGA AGTACCAGCG TTTCCTGCCT
TATGTTGGTC ACAGGGAAGA TCTTAACTAT CTGTTCAACG AAATGATGAG TGAACTGGTG
ATCGGCCATG CTTATGTCGG ACAGGGTGAT GCACCCAAAC CAGTCATTGA ATCAGGAGGC
CTACTGGGTG CTGACTACAG CATTGAAAAC GGGCACTATC GCTTTAAGAA GATATATTCC
GGTCTGAACT GGAACCCACA GTTCAGGGCA CCGCTGACGC AACCAGGTAT CAAGGTAAAA
GAAGGCGATT ATCTCATTGC AGTGAATGGT GTGCCTGTCA GCAGCAATAC AGAAATTTAC
AGCCTGTTTC AGAGTACTGC CGGTAAACAG GTACGTATAC TGGTCAACCA GCAACCTGAT
GCCAATGGCG CAAAAGAATA CACGGTGATA CCGCTTAATT CAGAAGCGGC ACTACGGGAA
ATGGATTGGG TAGAAGGCAA CCGTAAAAAG GTAGACCAGC TGAGCAATGG CAAACTTGCT
TATGTCTATA TGCCCAACAC CGGCGGAGAT GGGTACACTT ACTTCAACCG TTACTACTTC
TCCCAGCTGG ACAAGAAAGG CGTTATCATA GACGAACGCT TCAACGGTGG CGGCTCTGCG
GCTGACTATG TCATCGACCT GCTGAACCGT GATCTGCTCA ACTACTGGGG TACACGTGAA
GGCTTGCCGA TGACGACGCC GGGTAATGCC ATCTTTGGTC CGAAAGCTAT GATCACTAAC
AGTTATGCCG GCTCTGGCGG CGACCTGATG CCATTCATGT TCCATGAGAA GAAACTGGGG
CCGCTGGTAG GTACAACAAC GATGGGTATA CTGGTGGGAA TCTATAACTA TCCGGCACTG
ATGGATGGCG GATTTGTAAC GGCGCCACGC CTGGGTATCT TCAGTAAGGA TGGCAAATGG
ATCATTGAAA ATAAAGGCGT CGCTCCTGAT GTGGTAGTCG AAATGACCCC ACAGGAAGTG
ATTGCAGGGA AAGATCCGCA ACTGGAGAAA ACAGTCGAAT TGTTGATGAA AGACATAAAA
GAAACACCTG CTGTGCAGAA ACCTGTCGGC CCTGTCCGTG CAGAATAA
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| Protein sequence | MLHRPATLLM LTGLACAIAT AQSTETLLLR SPSISQHQIA FNYAGDIWTT DENGQHPQRI
TVNPDVELEP MLSPDGKWIA FSGNYDGNVD LYVVSVNGGI PRRITHHPDA DIVRGWHGND
KILFASTRNS FSMRFQQLFE VSVNGGMPVK LKMPEAHQGN ISPDGLYTAY IKNPDPTERS
GTYRPFKHYR GGNMPKIWIF NNQTNTVIEI PDAGANNIRP VWLGNDVYFL SDRNGTMNIF
RYSISGKTLT QISSHKDYDV KTLFSDGKTL VYEQAGRINK WDAASNKSTA LTISLEADLP
YKRPHYINAT VGALRNVNLS PTGVRAAVEF RGDVLTVPAE KGNIRNITAT PGVHERAPVW
SPDGKSIAYF SDAGGEYALH IRDQKAEKPA QIIPLGETSF FYSPLWSPDS KKILFADKKL
RLYYVDTESK KVTQIDEDSY DRPDQTFSAN WSPDSRWITY NKRLPNSLQA VFLYNIADKK
STQATDGRSE AAEPVFSKNG KYIFFIASTN YAQNTGWLDM TSYEHPVRSS IYAIVLSANA
PSLLAPESDD EQEKNEKEEK SDAKSDTKDS SKTQTAIDLA NIDQRIVALP LPADEYSQLN
GLVANKLLYR SGNTLYSYDI TKRKSDVLMS GIDGYTVSQN GEKLLYMASG SCGIVGTGSK
ANAGEGTLQI SNVRTLVDPA AEWPQMFDEL WRIERDFFYV DNMHGADWKA IKKKYQRFLP
YVGHREDLNY LFNEMMSELV IGHAYVGQGD APKPVIESGG LLGADYSIEN GHYRFKKIYS
GLNWNPQFRA PLTQPGIKVK EGDYLIAVNG VPVSSNTEIY SLFQSTAGKQ VRILVNQQPD
ANGAKEYTVI PLNSEAALRE MDWVEGNRKK VDQLSNGKLA YVYMPNTGGD GYTYFNRYYF
SQLDKKGVII DERFNGGGSA ADYVIDLLNR DLLNYWGTRE GLPMTTPGNA IFGPKAMITN
SYAGSGGDLM PFMFHEKKLG PLVGTTTMGI LVGIYNYPAL MDGGFVTAPR LGIFSKDGKW
IIENKGVAPD VVVEMTPQEV IAGKDPQLEK TVELLMKDIK ETPAVQKPVG PVRAE
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