| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0908 |
|---|
| Symbol | |
|---|
| ID | 8357022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1082511 |
|---|
| End bp | 1083698 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644963062 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_003120607 |
|---|
| Protein GI | 256419954 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0537628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA AATTCATTAC CCGTATCCAA AAAGAGCTGG ATGACATACG CTCAGCCGGC
CTTTTCAAGA ATGAGAGAGT TATCACTTCC GAACAAGGCG CTGAAATTCA GGTAGGCGGC
AATACCGTTA TTAACTTCTG TGCTAATAAC TACCTGGGTC TGTCCAGCCA CCCCGATGTG
GTAAAGGCTG CCAAAGAAGC CATCGACACT CACGGATATG GTATGAGCAG TGTACGCTTT
ATCTGCGGTA CGCAGGATAT ACACCGGGAA CTGGAGCAGA AACTGGCTAC CTTCCTCGGT
ACAGAAGATA CCATCCTCTA CGCAGCCGCA TTTGATGCAA ATGGTGGTGT ATTTGAACCA
TTGTTCAATG AAGAAGATGC CATCATCTCC GACGCCCTGA ACCATGCCTC TATTATTGAC
GGTGTTCGCC TCTGTAAAGC ACAGCGTTAC CGTTATGAGC ATAATAATAT GTCTGACCTG
GAAGCCAAAC TCCAGGAATC CGCTCACCTG CGCAGCCGCA TCATCGTAAC AGATGGTTCC
TTCAGTATGG ACGGTACCAT CGCTCAGCTG GATAAGATCT GCGACCTGGC GGATAAATAC
GACGCTATCG TAATGATCGA CGAAAGCCAT TCTTCCGGCT TCCTGGGTAA AACCGGTCGT
GGTACCCATG AATACCGTAA CGTAATGGGC CGTATCGACA TCATCACCGG TACCCTGGGT
AAAGCGTTAG GTGGTGCATC CGGTGGTTTC ACCAGCGGTA AAAAAGAGAT CATCGACATG
CTGCGTCAAC GTAGCCGCCC TTACCTGTTC TCTAACTCCG TAGCACCAAG CATCGTTGGC
GCATCCATCT CCGTACTGGA TATGCTGAGC GCAACCACCT CCCTGCGCGA TAAACTGGAG
TACAACACCC GTTACTTCCG TACCAAAATG ACGGAAGCCG GTTTCGATAT CAAACCTGGC
GATCACCCGA TCGTTCCCGT AATGCTGTAT GACGCAGTAC TCAGTCAGCA ATTTGCCGAC
AAACTGCTGA AAGAAGGTAT CTACGTAATA GGCTTCTTCT TCCCGGTTGT GGCAAAAGGC
CAGGCGCGTA TCCGTGTACA GCTCAGTGCC GCACACGAGC AGGCTCACCT GGATAAAGCC
ATCACCGCCT TTACCAAGGT GGGCAAAGAA TTAGGTGTAA TTAAATAA
|
|---|
| Protein sequence | MNQKFITRIQ KELDDIRSAG LFKNERVITS EQGAEIQVGG NTVINFCANN YLGLSSHPDV
VKAAKEAIDT HGYGMSSVRF ICGTQDIHRE LEQKLATFLG TEDTILYAAA FDANGGVFEP
LFNEEDAIIS DALNHASIID GVRLCKAQRY RYEHNNMSDL EAKLQESAHL RSRIIVTDGS
FSMDGTIAQL DKICDLADKY DAIVMIDESH SSGFLGKTGR GTHEYRNVMG RIDIITGTLG
KALGGASGGF TSGKKEIIDM LRQRSRPYLF SNSVAPSIVG ASISVLDMLS ATTSLRDKLE
YNTRYFRTKM TEAGFDIKPG DHPIVPVMLY DAVLSQQFAD KLLKEGIYVI GFFFPVVAKG
QARIRVQLSA AHEQAHLDKA ITAFTKVGKE LGVIK
|
|---|
| |