Gene Cpin_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0875 
Symbol 
ID8356989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1048468 
End bp1049607 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content49% 
IMG OID644963029 
ProductDNA polymerase III gamma/tau subunits-like protein 
Protein accessionYP_003120574 
Protein GI256419921 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTT CGAATGTCAT AGGTCAGGAA GATATACAAC AACAATTGAT CAGGTCCACA 
GAAAACAACC GGCTCGGTCA CGCTAATATT ATATTAGCGC CTGAGGGAGC AGGTGGCCTT
CCGCTGGGAC TGGCATTTGC GCAATACCTG GTCTGCGAAA ACAAACAACC TGATGGCGCC
TGCGGGCAAT GTCAGGCATG TACGAAAGCG GGTAGATACA TCCATCCTGA TATACACTTC
TCTTATCCGG TCATCCCCCG TAAACCGGGC GATAAACCGA TCAGCTCCGA CTACGCAGCC
GAATGGCGAG AGTTTATAGA TACGCATCCC TATGGGAATG CATATGACTG GTTACAGTTC
ATCGGAGCAG AAAATAAACA GGGGAATATC ACGGCCATGG AGTGCCAGGA CATCATCCGC
AAGCTGAGCC TGAAAAGCTT CGAGAGCACT TACAAGATAT TACTGATGTG GATGCCTGAG
TACCTCGGTA ACGAAGGTAA CAGACTGCTG AAACTGATAG AGGAACCACC AGACAATACC
ATTTTTCTGC TGGTGGCCGA AAACCAGGAA CAGATCCTGG CGACCATCCT CTCCCGTACA
CATCTTATTA AAGTGAACCC GCTGCCAAAA GAAGTGGTCG TTGACGCACT GATTAAACGC
GCCAACATCC CGGCAGCCAA AGCAAGACAG GCGGCAACCA TTGCATCAGG CAATTACAGG
GAAGCCCTGT ATATGCTGCA ACACTCGGAT GATGACTATC ACGAACTGTT ACGCAACTGG
CTCAACTATA TATTTACCGG CAACCGTGTA GCCCTGCAAG GCTGGGTGGA AGGAATTGCC
AGCGCCAAAA TGGGACGCGA AAATCAGAAA CAGTTCCTCC GCTATTTTAT CAACCTGCTG
GAACATACGC TGAGACTCAA GTATATAGAC AGGAGCCAGC TGGCTTTCGC GGAAGAAGAG
ACCGACTTTG CATTCAAACT GCAAAAGCTG GCCGACCTTC ACCAGATGGA GCAGATCATG
CAGGAACTCG ACAATGCCTG CTATTACATA GAACGCAACG CAAACGCTAA ACTGTTGTTC
CACGCACTTT CCATAAAGCT GCAGTATATC TTTAAAAAGC GGCCGATTCC GGCTGTATGA
 
Protein sequence
MLFSNVIGQE DIQQQLIRST ENNRLGHANI ILAPEGAGGL PLGLAFAQYL VCENKQPDGA 
CGQCQACTKA GRYIHPDIHF SYPVIPRKPG DKPISSDYAA EWREFIDTHP YGNAYDWLQF
IGAENKQGNI TAMECQDIIR KLSLKSFEST YKILLMWMPE YLGNEGNRLL KLIEEPPDNT
IFLLVAENQE QILATILSRT HLIKVNPLPK EVVVDALIKR ANIPAAKARQ AATIASGNYR
EALYMLQHSD DDYHELLRNW LNYIFTGNRV ALQGWVEGIA SAKMGRENQK QFLRYFINLL
EHTLRLKYID RSQLAFAEEE TDFAFKLQKL ADLHQMEQIM QELDNACYYI ERNANAKLLF
HALSIKLQYI FKKRPIPAV