| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0862 |
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| Symbol | |
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| ID | 8356976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1032829 |
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| End bp | 1034247 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963016 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_003120561 |
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| Protein GI | 256419908 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAAAA AAAATGTTAT TCTTGAAAAA GTCCCTGTAA GCGCATACGC CGCTGAGGGA
AAAGCACTGG CCCGGATTGA TGGGAAAGTG GTATTTATTG AAGGGGGTGT CGTACCCGGA
GATGTCGTAG ACGTTCGCCT CGGTAAAAAC AAAAAGGACT GGGCAGAAGG CAAAGCCATC
CATTTCCATT CTTACGCATC CAACCGCGTA ACTCCTTTCT GTGAGCATTT TGGTAACTGT
GGAGGCTGTA AATGGCAGAT GCTGCCATAT GATCAGCAGC TGGAATATAA ACAACAACAG
GTGGCTGACA ACCTGCAGCG TATCGGTAAA CTGGAATTGC CACCCATGCA ACCTATTATG
GGTTCCAGGC ATATCACCCA CTACCGTAAT AAACTTGAAT TTACTTTCAG TAATAAGGCT
TATCTCCCCG CAGATGAACT GGAACTGGAT GAAGACGGCA ATATTCCCCG GAAAAATGCC
CTCGGCTTCC ACGTTCCGAA GCTCTTTGAC AAGGTACTGG ACATTAACAC CTGTTACCTG
CAGGCAGAAC CGGTAAATGC CATCCGCAAC ACCATCCGCG CCTACGCCCT GGAGCACAAC
CTGTCTTTTT ATGACATCCG TGCAAAAGAG GGCTGGCTAC GTAACCTGGT GATCAGGATC
TGTACCACCG GCGAGGTAAT GGTCAATCTC GTGATCCATC ACGAAAACAA AAAAGACAGG
GAAGCCCTGC TGGATCACCT CCTGGCTACC GTCCCCGGCA TTACATCCGT ACTGTACACC
ATCAACCCGA AACTGAACGA TACCATTTTC GACCTGGAGC CGAAAACCTA TTTCGGTAAA
GGATATGTGG AAGAAAAACT GGAAGATTTC ACCTTCAAGA TCGGTCCGAA GTCCTTTTTC
CAGACGAATA CCTACCAGGG AGAGGCCCTC TACCAGGTAA CCCGGGATTT TGCCGGATTA
ACAGGAACAG AAATTGTTTA TGACCTATAT TGTGGTACTG GCAGTATTGG TATTTTTGTA
TCCCGGCAGG CAGGCAAAGT TGTGGGCATT GAACTGATCA AAGAGGCGAT TGACGATGCA
ATCGAAAACG CCGCCCGCAA CAATGTAAAC AACGCGCAAT TCTATGCCGG AGACGTAGTG
GACATCTGCA ATGATGCTTT CTTTGCACAG CACGGACAAC CTGACGTAGT TATCACCGAC
CCTCCAAGGG CCGGTATGCA CGAGAAACTG GTAAACAAGC TGCTCGAAAT CGCTGCTCCC
CGCATAGTTT ATGTGAGCTG TAACCCTGCT ACCCAGGCGA GAGACCTGGC GCTGCTGGAC
GTGATGTATA GCGTGAAAAA GATACAACCG GTGGATATGT TCCCCCACAC GCACCATATC
GAGAATGTGG TATTATTAGA GAAAAGAATT AATCATTAA
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| Protein sequence | MRKKNVILEK VPVSAYAAEG KALARIDGKV VFIEGGVVPG DVVDVRLGKN KKDWAEGKAI
HFHSYASNRV TPFCEHFGNC GGCKWQMLPY DQQLEYKQQQ VADNLQRIGK LELPPMQPIM
GSRHITHYRN KLEFTFSNKA YLPADELELD EDGNIPRKNA LGFHVPKLFD KVLDINTCYL
QAEPVNAIRN TIRAYALEHN LSFYDIRAKE GWLRNLVIRI CTTGEVMVNL VIHHENKKDR
EALLDHLLAT VPGITSVLYT INPKLNDTIF DLEPKTYFGK GYVEEKLEDF TFKIGPKSFF
QTNTYQGEAL YQVTRDFAGL TGTEIVYDLY CGTGSIGIFV SRQAGKVVGI ELIKEAIDDA
IENAARNNVN NAQFYAGDVV DICNDAFFAQ HGQPDVVITD PPRAGMHEKL VNKLLEIAAP
RIVYVSCNPA TQARDLALLD VMYSVKKIQP VDMFPHTHHI ENVVLLEKRI NH
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