| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0856 |
|---|
| Symbol | |
|---|
| ID | 8356970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1026253 |
|---|
| End bp | 1027263 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963010 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_003120555 |
|---|
| Protein GI | 256419902 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC AGCCATTTGT TAATATGTAC AAAATACTAA GTTTTGCAGC AGGTGTGGCC
TTGTGCATGA GCGCCTGTAA GCAGCCGACA AAAACCAATC AGCCGGAAGA ATCCGGCAAG
CCAACGGCGA CCGTTCAGAA TGTGAATGTA CCCGTATTTC AGACAGACAG TGCTTATGCC
TATACGGCAA AACAGGTAAG TTTCGGTCCG CGTATTCCCA ACACACCGGC ACAGCAGAAG
TGTGCTGACT GGCTGATCGC GCAACTGAAG CCCCTTGCAG ATACTGTATA CATACAGCGC
ACTACGGTAA AAGGCCCTAA AAAAGTACCA TTACCTTGTA TCAATATCAT CGCCAGTTTC
AATCCGGCAG CGACGCAGCG TGTATTACTG CTCTCCCACT GGGATACCCG TCCACATGCC
GACCAGGATG CTTTTGACAG GAACAAACAA CTGGATGGTG CTGACGATGG CGCCAGCGGT
GTGGGTGTGC TGATTGAAGT AGCCCGTCAG CTACATGCGG ATAAACCAAA AGCAGGTGTT
GATATACTGT TGACTGACGT GGAAGATTAT GGTATCAGTG AAGAGGAGAA CAGCTATTGC
CTGGGTACGC AATACTGGGC TAAAAACCCG CACGTAAGAG GCTATAAAGC GAACTACGGT
ATCCTCCTGG ATATGGTGGG TGGCCGCGCT TCTCAGTTCT TTATGGAAGG CGGTTCCCAA
CAGTATGCTT ACGGTCCGAT GAAAATGTTC TGGGATGTAG CCAACCGGCT GGGTTATTCT
GATTACTTCC GTTATGAAAA TATCGGTACC AGCATTACAG ACGATCACGT ATATGTAAAT
ACGATGGCGA ATATTCCAAC TTTTGATATC ATCGCGCTGC AACAGAACGG TAACTTCGTT
CCGCACTGGC ACACGGCAAA TGATAACATG ACAGTAATCG ACAAACGTAC ATTACAGGTA
GTTGGTCAGA CGATCTTAGA AGTTTTATAC AGGCAACCTT TCGAGTACTA A
|
|---|
| Protein sequence | MIKQPFVNMY KILSFAAGVA LCMSACKQPT KTNQPEESGK PTATVQNVNV PVFQTDSAYA
YTAKQVSFGP RIPNTPAQQK CADWLIAQLK PLADTVYIQR TTVKGPKKVP LPCINIIASF
NPAATQRVLL LSHWDTRPHA DQDAFDRNKQ LDGADDGASG VGVLIEVARQ LHADKPKAGV
DILLTDVEDY GISEEENSYC LGTQYWAKNP HVRGYKANYG ILLDMVGGRA SQFFMEGGSQ
QYAYGPMKMF WDVANRLGYS DYFRYENIGT SITDDHVYVN TMANIPTFDI IALQQNGNFV
PHWHTANDNM TVIDKRTLQV VGQTILEVLY RQPFEY
|
|---|
| |