Gene Cpin_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0815 
Symbol 
ID8356928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp978019 
End bp979392 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content48% 
IMG OID644962968 
Producthypothetical protein 
Protein accessionYP_003120514 
Protein GI256419861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0109394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTGT TAAGATTGTC CCCGGTGCTG GTGTATTGCC TGTTGTTATT AACAATAAGC 
TCCTGTAGGA AAGAAGTTTC GCTTGAAGGA ATTCCTCCGG AGACAGAACC TCCCCCTGCT
CAAATTGTCA CTACCGGTAT CCAGGGACGT GTACTGAACG AACAACGTCA GCCGGTACAG
GGCGCAACTG TAAGCGGTGG CGGTGTAACA GCCACGACTG ATGCAAACGG TTATTTTCTG
CTGGAAAAAA TTAATGGCCC CGATGATGCG ACTGTTGTAA GTGTGGATAA AGCTGGCTAT
TTCAAAGGCT ACCGCACACT GATGGTACGG GAAGGGATCA TACAATATAT ACAAATCGAA
CTGCTGCTTG AAAATCAGAA TCCAATAAGT GGAACTACCG GCGGCGTGAT CCCCTTTCCA
GAAGGAACCC TCACCTTTCC GGCCGGCAGC ATTCTGACCG CTGGTGACCA GCCATATGGC
GGTCCTGTAA CTGTCCGTTC TATTTATATC AATCCGGAGA ACAGTACTAT CGCCGATCAG
ATGCCTGGCG ACCTGAGAGG CATCAATGAC CAGAACAGAC AGGTGTTCCT GCGGGCCTTC
AGTATGATCT CCACCACGAT GGAAGATGGC GCCGGTAATG CCCTGCATCC GGACTCTACC
AACCCGGCCA TTTTCCGCAT TATGATACCT AATACCCTGG CCAGCAATGC GCCTACGGAA
ATACCTCTCT GGTATTTTAA CGGAGATACC GGTTTCTGGG TCCAGGAAGG GACTGCTACA
CGTGAAGGCA ATGATTATGT CGGTAATATC ACAAAACCCG GCTATTGGCT ATGTGCCACC
ACCCTTCCTC AGATCGTTCT CACTGCTGAT ATTAAAGATC AGAATGGTGA TCCGGTGCCC
AATCTCAGGG TAACGGTGAT GACTAAAGTA GATTTCATAC CCTCCTTCGC CTTCTCTGCT
GAAGATGGTA TATTCTATGG TAAAATCCCC GCGAATAATG TGTTGATCCT GACAGTTACT
GATAACTGCG ACAATGTACT GCGTCAGCAG GAAATAGGCC CTTTCAGCAC AGCTGCCACA
GTTAGTAACA TCACCATCAC CCTGCCGGCA AGTAATTCCC TGGTTATCAA GGGAACGGCT
AAAGACTGTG ATAATGCCAA TGTAGCGGCC GGAAAAGTGA TCATCAATAT CGATGGGCTG
AATTACGCCT CCACCATTTC ACAAGGTAGT TTCAATACAA CGATTGTCAG ATGTCAAAAT
GATCCGGTCA ACATCACACT GACCGCAACA GACAATGGTT CAGGAAAAAC CTCCGCCATG
ACGACCAACG CCAGCAATGG CACTATCACC CCCAATATTG TGGTCTGTGA TTAA
 
Protein sequence
MHLLRLSPVL VYCLLLLTIS SCRKEVSLEG IPPETEPPPA QIVTTGIQGR VLNEQRQPVQ 
GATVSGGGVT ATTDANGYFL LEKINGPDDA TVVSVDKAGY FKGYRTLMVR EGIIQYIQIE
LLLENQNPIS GTTGGVIPFP EGTLTFPAGS ILTAGDQPYG GPVTVRSIYI NPENSTIADQ
MPGDLRGIND QNRQVFLRAF SMISTTMEDG AGNALHPDST NPAIFRIMIP NTLASNAPTE
IPLWYFNGDT GFWVQEGTAT REGNDYVGNI TKPGYWLCAT TLPQIVLTAD IKDQNGDPVP
NLRVTVMTKV DFIPSFAFSA EDGIFYGKIP ANNVLILTVT DNCDNVLRQQ EIGPFSTAAT
VSNITITLPA SNSLVIKGTA KDCDNANVAA GKVIINIDGL NYASTISQGS FNTTIVRCQN
DPVNITLTAT DNGSGKTSAM TTNASNGTIT PNIVVCD