Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0815 |
Symbol | |
ID | 8356928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 978019 |
End bp | 979392 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644962968 |
Product | hypothetical protein |
Protein accession | YP_003120514 |
Protein GI | 256419861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0109394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTTGT TAAGATTGTC CCCGGTGCTG GTGTATTGCC TGTTGTTATT AACAATAAGC TCCTGTAGGA AAGAAGTTTC GCTTGAAGGA ATTCCTCCGG AGACAGAACC TCCCCCTGCT CAAATTGTCA CTACCGGTAT CCAGGGACGT GTACTGAACG AACAACGTCA GCCGGTACAG GGCGCAACTG TAAGCGGTGG CGGTGTAACA GCCACGACTG ATGCAAACGG TTATTTTCTG CTGGAAAAAA TTAATGGCCC CGATGATGCG ACTGTTGTAA GTGTGGATAA AGCTGGCTAT TTCAAAGGCT ACCGCACACT GATGGTACGG GAAGGGATCA TACAATATAT ACAAATCGAA CTGCTGCTTG AAAATCAGAA TCCAATAAGT GGAACTACCG GCGGCGTGAT CCCCTTTCCA GAAGGAACCC TCACCTTTCC GGCCGGCAGC ATTCTGACCG CTGGTGACCA GCCATATGGC GGTCCTGTAA CTGTCCGTTC TATTTATATC AATCCGGAGA ACAGTACTAT CGCCGATCAG ATGCCTGGCG ACCTGAGAGG CATCAATGAC CAGAACAGAC AGGTGTTCCT GCGGGCCTTC AGTATGATCT CCACCACGAT GGAAGATGGC GCCGGTAATG CCCTGCATCC GGACTCTACC AACCCGGCCA TTTTCCGCAT TATGATACCT AATACCCTGG CCAGCAATGC GCCTACGGAA ATACCTCTCT GGTATTTTAA CGGAGATACC GGTTTCTGGG TCCAGGAAGG GACTGCTACA CGTGAAGGCA ATGATTATGT CGGTAATATC ACAAAACCCG GCTATTGGCT ATGTGCCACC ACCCTTCCTC AGATCGTTCT CACTGCTGAT ATTAAAGATC AGAATGGTGA TCCGGTGCCC AATCTCAGGG TAACGGTGAT GACTAAAGTA GATTTCATAC CCTCCTTCGC CTTCTCTGCT GAAGATGGTA TATTCTATGG TAAAATCCCC GCGAATAATG TGTTGATCCT GACAGTTACT GATAACTGCG ACAATGTACT GCGTCAGCAG GAAATAGGCC CTTTCAGCAC AGCTGCCACA GTTAGTAACA TCACCATCAC CCTGCCGGCA AGTAATTCCC TGGTTATCAA GGGAACGGCT AAAGACTGTG ATAATGCCAA TGTAGCGGCC GGAAAAGTGA TCATCAATAT CGATGGGCTG AATTACGCCT CCACCATTTC ACAAGGTAGT TTCAATACAA CGATTGTCAG ATGTCAAAAT GATCCGGTCA ACATCACACT GACCGCAACA GACAATGGTT CAGGAAAAAC CTCCGCCATG ACGACCAACG CCAGCAATGG CACTATCACC CCCAATATTG TGGTCTGTGA TTAA
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Protein sequence | MHLLRLSPVL VYCLLLLTIS SCRKEVSLEG IPPETEPPPA QIVTTGIQGR VLNEQRQPVQ GATVSGGGVT ATTDANGYFL LEKINGPDDA TVVSVDKAGY FKGYRTLMVR EGIIQYIQIE LLLENQNPIS GTTGGVIPFP EGTLTFPAGS ILTAGDQPYG GPVTVRSIYI NPENSTIADQ MPGDLRGIND QNRQVFLRAF SMISTTMEDG AGNALHPDST NPAIFRIMIP NTLASNAPTE IPLWYFNGDT GFWVQEGTAT REGNDYVGNI TKPGYWLCAT TLPQIVLTAD IKDQNGDPVP NLRVTVMTKV DFIPSFAFSA EDGIFYGKIP ANNVLILTVT DNCDNVLRQQ EIGPFSTAAT VSNITITLPA SNSLVIKGTA KDCDNANVAA GKVIINIDGL NYASTISQGS FNTTIVRCQN DPVNITLTAT DNGSGKTSAM TTNASNGTIT PNIVVCD
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