Gene Cpin_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0804 
Symbol 
ID8356917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp966459 
End bp967535 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content48% 
IMG OID644962957 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_003120503 
Protein GI256419850 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA GGAATTTTAA AATGGTTGAT TATGTGGTGT TTGGCCGTGG TGCGTTTGAC 
CAGCTTGACG AAATACTGGC GCCCCGCCGT CTGGGCGATG CGCCGATGAT ATTTTTCGTA
GACCACTTCT TTCAGGGAAA TGAAGCGTTT GCAAAACGTG TTCCCCTGAG AGGCAAAGAT
AAAATCGTAT ACATCGACGT TACCGACGAA CCAAAGACTA AATACGTAGA CAAGGTAAGA
GACGACCTGA AAGCGGAATT CGGTGAAGTA AGCGGTATCA TTGGTATCGG TGGCGGATCC
GTAATGGATA TGGCCAAAGC CGTAGCCCTG ATGATGAAGA ACCCTGGTTC TTCTGCGGAC
TATCAGGGAT GGGACCTGGT AAAAGTAGCG GGTGTGTACA AAGTAGGTAT CCCTACCATT
TCCGGCACCG GCGCTGAAGT AAGCCGTACC TGTGTATTGA CTGGTCCTAC CCGTAAACTG
GGTATGAACT CTGACTTTAC ACCATTTGAC CAGATCGTAC TCGATCCGGA ATTAATCAAA
GGCGTACCGG TAAACCAGCA ATTCTACACT GCGATGGATT GCTATATTCA CTGTATCGAA
TCCCTGCAGG GTACTTATCT GAATGCATTC AGCCGTTCTT ATGGTGAAGA AGCGCTTCGC
CTCTGCCAGG AGATTTTCCT GCACAAAGAG CAGTGGGATG ATGATGCAGA TGAGAAGCTG
ATGATGGCTT CTTATGCCGG CGGTATGAGT ATCGCTTATT CCCAGGTAGG TGTGGCACAT
GCGGTAAGCT ATGGCCTGGC ATACCTGCTG GGAACCAAAC ACGGTATCGG TAACTGTATC
GTATTTGACA AGCTGGAAGA ATTCTATCCG GAAGGCGTGA AAGAGTTCAA AGAAATGGTG
AAAAAACATA ACATCGACAT TCCGCAGGGT ATTACCAAAG GACTGACCGA TGAACAGTTT
AACATCATGA TTGACGTATC GTTGGGTATG GCGCCGCTGT GGGAAAATGC CCTGGGCAAA
GACTGGAAAG AGCAGATGAC ACGTGAGCGT TTACGCGCAC TGTACGAGCA GCTGTAA
 
Protein sequence
MKFRNFKMVD YVVFGRGAFD QLDEILAPRR LGDAPMIFFV DHFFQGNEAF AKRVPLRGKD 
KIVYIDVTDE PKTKYVDKVR DDLKAEFGEV SGIIGIGGGS VMDMAKAVAL MMKNPGSSAD
YQGWDLVKVA GVYKVGIPTI SGTGAEVSRT CVLTGPTRKL GMNSDFTPFD QIVLDPELIK
GVPVNQQFYT AMDCYIHCIE SLQGTYLNAF SRSYGEEALR LCQEIFLHKE QWDDDADEKL
MMASYAGGMS IAYSQVGVAH AVSYGLAYLL GTKHGIGNCI VFDKLEEFYP EGVKEFKEMV
KKHNIDIPQG ITKGLTDEQF NIMIDVSLGM APLWENALGK DWKEQMTRER LRALYEQL