Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0792 |
Symbol | |
ID | 8356905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 958286 |
End bp | 959320 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962945 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003120491 |
Protein GI | 256419838 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.101192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAA TAGACAACGA GCGTATAAAA CAAGTCAGCT TCCTGCTTAT CATTCTGCTA CTGGCATATG TACTGTTCAA AGAATTGTAT ACATTTTTCC CCGGATTCCT CGGCGCTGTT ACCATGTATA TACTAAGCAG GAAATTTATG TTCCGGCTGG TAGAAAAACG TAACTGGAAA AAGAGTGCCG CTGCCGCGTT ACTCATGGTG CTCTCCTTTA TCATCGTTCT ACTGCCCTTT GGTATGCTGA TCAATATGCT TACGGATAAG ATCGGATACG CCGTATCTCA TTCGCAGGAA ATGGTCGCTG GTATTGAAAA GCTGAATGTT CGCATAAAGG AATCTACCAA CTTTGATGTG TTGTCACAGG TAAAACTGGA ACGTCTGCAA GGTTACCTTA CATCCGTACT GCCAACCTTG CTGGGCGCCA CTTTCAATAC ACTAACTGCC ATCGCTATAC TCTATTTTAT TCTGTACTTC ATGCTTGTGA ACGCCAGGGA AATGGAAGCA TGGTTGTATG AGTACATTCC ATTGAAAGAT GAGAACGTGC TCCGCCTGGG GACAGAATTC CATAAACTGG TGATTGCCAA TGCTGTCGGG ATCCCCGCTA TTGCGCTCAT CCAGGGCGTC GTGTCTCTGA TAGGATATTT TATATTCCAG GTACCACAGC CTGTTTTCTG GTTTGCCGTA ACCTGTTTTA CGGCTATGCT ACCTGTAGTA GGCGCGGCTG CTGTATATGT TCCTATGGGA CTTTATCTGC TTGGTACCGG TATGACCTGG CAGGGCATCG GCGTGCTGGT ATATGGCTTT GCGGTCGTAG GTACTTCGGA TAATATATTC CGTTTTGTAT TAGCCAAGCG AATCGGAGAT GTACATCCGC TGATCACGGT ATTTGGAGTG CTGATAGGTG TGAATCTCTT CGGTTTTATC GGACTGATCT TTGGTCCTTT ACTGATCTCA ATGTTTATCC TGCTACTGGA GATCTACTCA AATGAATTCT TCACAAAGAA GCGCGAAGTG CGTATCAAAC AGTGA
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Protein sequence | MSVIDNERIK QVSFLLIILL LAYVLFKELY TFFPGFLGAV TMYILSRKFM FRLVEKRNWK KSAAAALLMV LSFIIVLLPF GMLINMLTDK IGYAVSHSQE MVAGIEKLNV RIKESTNFDV LSQVKLERLQ GYLTSVLPTL LGATFNTLTA IAILYFILYF MLVNAREMEA WLYEYIPLKD ENVLRLGTEF HKLVIANAVG IPAIALIQGV VSLIGYFIFQ VPQPVFWFAV TCFTAMLPVV GAAAVYVPMG LYLLGTGMTW QGIGVLVYGF AVVGTSDNIF RFVLAKRIGD VHPLITVFGV LIGVNLFGFI GLIFGPLLIS MFILLLEIYS NEFFTKKREV RIKQ
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