Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0776 |
Symbol | |
ID | 8356889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 942049 |
End bp | 943023 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962929 |
Product | KpsF/GutQ family protein |
Protein accession | YP_003120475 |
Protein GI | 256419822 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA GAACGGTTAT TAATATTGCT GAAGTGGCGA AAAGGACGCT GTCCCTCGAG GCAACAGCGA TCTCCGACCT GAAGCAATAC ATCAATGGTG ATTTTGAAAA GGCGGTAGAG TGGATCGCGG AATGTGCCGG ACGACTGGTA ATTTCCGGGA TAGGGAAAAG CGCTATCATC GGTCAGAAAA TTGTTGCCAC GCTGAATTCC ACGGGAACCC CCGCTATTTT TATGCACGCA GCAGATGCTA TCCACGGAGA TTTGGGTATG ATCCAGCATG ACGATATCAT ATTGTGTATT TCTAAGAGCG GTAATTCTCC TGAAATAAAA GTACTGGTTC CGCTTGTGAA GAACTTTGGC AACAGATTGA TTGCCATGGT CGGCAATACG GAGTCTTTTC TGGCACGTGA AGCCCATCTT ATCCTGAATA CTTCAGTAGA CCAGGAAGCC TGTCCAAATA ATCTGGCGCC TACGACCAGC ACGACTGCCC AATTGGCAAT GGGGGATGCT TTGGCCGTAT GTTTGATAGA ATGGCATGGA TTTTCTGCTG CTGATTTTGC AAAAGTTCAT CCGGGAGGTA CACTGGGTAA AAAGCTGTAT CTCAAGGTCG GAGACCTGAG TCGCCTCCAC CAGGCGCCAC AGGTGACAAA ACAAAGTGCA CTGAAAGAAG TGATCGTAGC CATCTCTTCC GGTATGCTGG GCGTTACCGC TGTACTGGAC GCAGAAGGCT CACTGAGTGG AATCATCACT GACGGAGACC TTCGCCGTAT GCTTGAAAAA GGCATTCCGG GCGAAAGTGT CACAGCAGAA GTTATCATGT CAACGCATCC GAAGACGATC CAGGAAGACG AACTTGCGGT CAATGCACTC GAAATGATGC GTCAACATGA CATAACACAA CTATTGGTTT TGAAAGATAA ACGCTATATA GGTATCATTC ATTTACATGA TTTAATCAGG GAAGGAATTA TATAA
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Protein sequence | MKNRTVINIA EVAKRTLSLE ATAISDLKQY INGDFEKAVE WIAECAGRLV ISGIGKSAII GQKIVATLNS TGTPAIFMHA ADAIHGDLGM IQHDDIILCI SKSGNSPEIK VLVPLVKNFG NRLIAMVGNT ESFLAREAHL ILNTSVDQEA CPNNLAPTTS TTAQLAMGDA LAVCLIEWHG FSAADFAKVH PGGTLGKKLY LKVGDLSRLH QAPQVTKQSA LKEVIVAISS GMLGVTAVLD AEGSLSGIIT DGDLRRMLEK GIPGESVTAE VIMSTHPKTI QEDELAVNAL EMMRQHDITQ LLVLKDKRYI GIIHLHDLIR EGII
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