Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0773 |
Symbol | |
ID | 8356885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 937400 |
End bp | 938284 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644962925 |
Product | protein of unknown function DUF1130 |
Protein accession | YP_003120472 |
Protein GI | 256419819 |
COG category | [S] Function unknown |
COG ID | [COG5483] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTATA GACGTAAAAT CATTCTTGCT TTATTAGAGC TTTTCGAAGA CGAACTTGAA AAAATACGCC TGCAAAAGCT TTTGTTCTTG TTTTGTCAGA AACAAGAGAA GGCTGACTAT GATTTTATCC CGTATAAATA TGGTTGCTAT TCATACTCTG CAAATGCTGA TATGACAACA ATGGTAACAA AGGGGTTATT AGCCGAAACA GCCACGAGTT TTAAAAAAAC TGATAACGTT AGCTATTTAA AGCTCCTGAA GCCTCATGAC CTTTCTAAGC TCAAAAGTAT AAAGACGCTT TATGGAGAGA TGGACAGTAC TGCGCTGATG AAACATACAT ATAGAAATTT CCCGTATTGG GCCATCAATA GTATAAAAGC TCCCTCTATT TTATCAAAAG AAGAGTTGGA TAAAGTAGAA AAACATAAGG CATCCTCTAA TCAAACGATT CTATATACAA TTGGTTATGA GGGAGGAAGT TTAGAAGATT ATTTAAATCG ACTGCTGAGA AATGATGTCA AAGTCTTAAT AGATGTCCGC AATAATCCTC TAAGTATGAA ATTTGGATTT AGCAAGAGTC TACTTAAACG CTATTGTGAA AGTCTCGATA TTATCTATAT GCATTTTCCC GAAGTTGGGA TTGTATCAGA TAAAAGACAG GCATTGAATA CTCAAGCTGA CTATGATAGA TTATTTGCGG ATTATTGCGA GAATGATATT CCAAAAACGA TTGATATTCA ATTAGATATT TTAAATATTT TACGGAAATA TAAGCGAATT GCTTTAACTT GCTTTGAGGC AAATTATTGC CAATGTCACA GAAGCCATTT AGCAAATGCA ATAAAAACGC TACCGGGCTT CGAGTACGAA GTAAAACACA TATAG
|
Protein sequence | MFYRRKIILA LLELFEDELE KIRLQKLLFL FCQKQEKADY DFIPYKYGCY SYSANADMTT MVTKGLLAET ATSFKKTDNV SYLKLLKPHD LSKLKSIKTL YGEMDSTALM KHTYRNFPYW AINSIKAPSI LSKEELDKVE KHKASSNQTI LYTIGYEGGS LEDYLNRLLR NDVKVLIDVR NNPLSMKFGF SKSLLKRYCE SLDIIYMHFP EVGIVSDKRQ ALNTQADYDR LFADYCENDI PKTIDIQLDI LNILRKYKRI ALTCFEANYC QCHRSHLANA IKTLPGFEYE VKHI
|
| |