Gene Cpin_0773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0773 
Symbol 
ID8356885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp937400 
End bp938284 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content34% 
IMG OID644962925 
Productprotein of unknown function DUF1130 
Protein accessionYP_003120472 
Protein GI256419819 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTATA GACGTAAAAT CATTCTTGCT TTATTAGAGC TTTTCGAAGA CGAACTTGAA 
AAAATACGCC TGCAAAAGCT TTTGTTCTTG TTTTGTCAGA AACAAGAGAA GGCTGACTAT
GATTTTATCC CGTATAAATA TGGTTGCTAT TCATACTCTG CAAATGCTGA TATGACAACA
ATGGTAACAA AGGGGTTATT AGCCGAAACA GCCACGAGTT TTAAAAAAAC TGATAACGTT
AGCTATTTAA AGCTCCTGAA GCCTCATGAC CTTTCTAAGC TCAAAAGTAT AAAGACGCTT
TATGGAGAGA TGGACAGTAC TGCGCTGATG AAACATACAT ATAGAAATTT CCCGTATTGG
GCCATCAATA GTATAAAAGC TCCCTCTATT TTATCAAAAG AAGAGTTGGA TAAAGTAGAA
AAACATAAGG CATCCTCTAA TCAAACGATT CTATATACAA TTGGTTATGA GGGAGGAAGT
TTAGAAGATT ATTTAAATCG ACTGCTGAGA AATGATGTCA AAGTCTTAAT AGATGTCCGC
AATAATCCTC TAAGTATGAA ATTTGGATTT AGCAAGAGTC TACTTAAACG CTATTGTGAA
AGTCTCGATA TTATCTATAT GCATTTTCCC GAAGTTGGGA TTGTATCAGA TAAAAGACAG
GCATTGAATA CTCAAGCTGA CTATGATAGA TTATTTGCGG ATTATTGCGA GAATGATATT
CCAAAAACGA TTGATATTCA ATTAGATATT TTAAATATTT TACGGAAATA TAAGCGAATT
GCTTTAACTT GCTTTGAGGC AAATTATTGC CAATGTCACA GAAGCCATTT AGCAAATGCA
ATAAAAACGC TACCGGGCTT CGAGTACGAA GTAAAACACA TATAG
 
Protein sequence
MFYRRKIILA LLELFEDELE KIRLQKLLFL FCQKQEKADY DFIPYKYGCY SYSANADMTT 
MVTKGLLAET ATSFKKTDNV SYLKLLKPHD LSKLKSIKTL YGEMDSTALM KHTYRNFPYW
AINSIKAPSI LSKEELDKVE KHKASSNQTI LYTIGYEGGS LEDYLNRLLR NDVKVLIDVR
NNPLSMKFGF SKSLLKRYCE SLDIIYMHFP EVGIVSDKRQ ALNTQADYDR LFADYCENDI
PKTIDIQLDI LNILRKYKRI ALTCFEANYC QCHRSHLANA IKTLPGFEYE VKHI