| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0749 |
|---|
| Symbol | |
|---|
| ID | 8356861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 907032 |
|---|
| End bp | 908900 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644962901 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_003120448 |
|---|
| Protein GI | 256419795 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCAT CATACGATGT AATTGTGGTA GGCGCCGGAC ATGCCGGTTG CGAGGCTGCA
GCTGCGGCAG CAAACATGGG ATCCAAAGTC CTTTTGGTCA CCATGAATAT GCAAACGATA
GCTCAGATGA GCTGCAACCC AGCAATGGGA GGAATCGCTA AAGGACAAAT TGTAAGGGAG
ATTGATGCTC TGGGAGGATA CTCAGGAATC ATAACCGATC AGTCCATGAT TCAGTTCCGT
ATGCTGAACC GTTCCAAAGG ACCTGCCATG TGGAGCCCCC GTACACAGAA CGACAGAATG
CTGTTTGCTG CTAAGTGGAG AGAGGCATTG GAACAAACAC CAAACGTTGA CTTCTACCAG
GACATGGTAA AAGGACTGCT GGTAAAAGAT GGACGTTGCT ATGGAGTAGT GACCGGATTA
GGACACGAAA TAAAAGCAAA ATCTGTAGTG CTCACCAACG GTACATTCCT CAATGGTGTC
ATGCACATCG GAGATAAACA GTTCGGCGGA GGTCGCGTAG CAGAAAAAGC AGCTACCGGA
ATTACTGAAC AATTAGTATC CCTAGGCTTC GAAAGCGACA GATTGAAGAC AGGTACACCA
CCAAGAATCG ATGCAAGAAG TCTGGATTAT TCGAAAATGG AAGAACAACC AGGTGATGAT
GTAATCACCG GGTTCTCTTA TCTGGATGTT GAAAAGATCA AACCTGAACA ACAGAGAAGT
TGCCATATCA CCTATACAAG TGATAAAGTA CACGAAATGC TGAAGACAGG GTTCGACAGA
TCTCCAATGT TCCAGGGTAG AATTCAGGGT GTCGGACCAA GATACTGTCC AAGTATTGAA
GATAAAATTA ACCGTTTCGC GGAAAGAGAC AGACACCAAC TGTTCGTAGA ACCCGAAGGT
TGGAACACCG TGGAGATCTA TGTAAATGGA TTTTCAACCT CCCTGCCGGA AGATGTACAG
TATAAAGCAC TTCAATTAGT GCCCGGATTT GAGAACGTGA AAATGTTCCG TCCGGGTTAT
GCGATTGAGT ACGATTACTT CCCACCAACA CAATTGCAGT TCTCCCTGGA GACAAAACAT
ATCCAGAATT TGTTCTTCGC CGGACAAATC AACGGTACCA CCGGGTATGA AGAAGCAGCA
TGTCAGGGTC TGATGGCAGG TATAAATGCA CACCTGAAAG CAAGCGGTCA GGCGCCATTT
GTACTGAAAA GAAGTGAAGC ATATATCGGT GTACTGATCG ATGACCTGAT TAATAAAGGT
ACCGACGAAC CATATAGAAT GTTTACCTCA AGAGCCGAAT TCAGAACTTT GCTCAGACAG
GATAATGCCG ATCTGCGTCT CACAGAACAG AGTTTTGAAA TGGGCCTCGC CAGACAAAAC
AGATTGGATA AAGTGATCGT GAAGAAAGAA GGAGTGGAGA AAATCAAAGC AATTCTGAAA
GAACTGCCTG TTGATCCGGA AGAAATTAAT CACCTGCTGG CAGAGAAAAA TACTTCACCA
CTGCCTCAGC GTATGCGCGC TTACCAAATC CTGTTACGCC CAACTATGGA TATATTCTCT
ATGAAGAACC ATGTTGCGAA AATTGGAAAA GCACTGGCTG AATTCGGAGA TGAAACATTG
GAACAGGCAG AGATCCAGAT CAAATATGAA GTATACATCG AAAAGGAAAA TGACCTGGTG
AAAAGAATGA GCCAGATGGA AGACCTGCTC ATTCCAGATG GATTCGATTA TACAAAATTG
GTATCATTGA GCGCAGAAGC CAGACAGAAA TTTAATAAAA TCCGTCCCCG TACACTCGGA
CAAGCCAGCA GAATCAGCGG CGTAAATCCG AGTGATGTGC AGATCCTGAT GGTATACATG
GGACGCTGA
|
|---|
| Protein sequence | MFPSYDVIVV GAGHAGCEAA AAAANMGSKV LLVTMNMQTI AQMSCNPAMG GIAKGQIVRE
IDALGGYSGI ITDQSMIQFR MLNRSKGPAM WSPRTQNDRM LFAAKWREAL EQTPNVDFYQ
DMVKGLLVKD GRCYGVVTGL GHEIKAKSVV LTNGTFLNGV MHIGDKQFGG GRVAEKAATG
ITEQLVSLGF ESDRLKTGTP PRIDARSLDY SKMEEQPGDD VITGFSYLDV EKIKPEQQRS
CHITYTSDKV HEMLKTGFDR SPMFQGRIQG VGPRYCPSIE DKINRFAERD RHQLFVEPEG
WNTVEIYVNG FSTSLPEDVQ YKALQLVPGF ENVKMFRPGY AIEYDYFPPT QLQFSLETKH
IQNLFFAGQI NGTTGYEEAA CQGLMAGINA HLKASGQAPF VLKRSEAYIG VLIDDLINKG
TDEPYRMFTS RAEFRTLLRQ DNADLRLTEQ SFEMGLARQN RLDKVIVKKE GVEKIKAILK
ELPVDPEEIN HLLAEKNTSP LPQRMRAYQI LLRPTMDIFS MKNHVAKIGK ALAEFGDETL
EQAEIQIKYE VYIEKENDLV KRMSQMEDLL IPDGFDYTKL VSLSAEARQK FNKIRPRTLG
QASRISGVNP SDVQILMVYM GR
|
|---|
| |