Gene Cpin_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0736 
Symbol 
ID8356848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp892276 
End bp892650 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content45% 
IMG OID644962888 
Productrare lipoprotein A 
Protein accessionYP_003120435 
Protein GI256419782 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0240086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000179293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGACAA TGAAATATAC ACGCAATACA ATACTCCTGC TCAGCGCATT ATTTTTCTTA 
GCGTCCTGCA GCAAGAAGAT CACAGAAACA GGAAAGGCGT CTTATTATGC TGACAAGTTT
GAAGGCCGTA AAACTGCCAG TGGGGAAGTA TTCAGACAGG GAGGATTGAC AGCAGCACAT
CGCACATTGC CTTTCGGCAC CAAAGTGACT GTTATTAACG TATCAAACGG CCGCTCAGTA
AAAGTGCGCA TCAATGACCG TGGACCGTTT GCCGAAGGCA GAGTAATTGA TCTCTCCAAG
AAAGCGGCAA AACGTATTGG TATGCTCACA ACAGGTGTCG CGCCTGTAGA GGTAAAATAC
AAGAAGAAGA AATAA
 
Protein sequence
MMTMKYTRNT ILLLSALFFL ASCSKKITET GKASYYADKF EGRKTASGEV FRQGGLTAAH 
RTLPFGTKVT VINVSNGRSV KVRINDRGPF AEGRVIDLSK KAAKRIGMLT TGVAPVEVKY
KKKK