Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0736 |
Symbol | |
ID | 8356848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 892276 |
End bp | 892650 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962888 |
Product | rare lipoprotein A |
Protein accession | YP_003120435 |
Protein GI | 256419782 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0240086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000179293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGACAA TGAAATATAC ACGCAATACA ATACTCCTGC TCAGCGCATT ATTTTTCTTA GCGTCCTGCA GCAAGAAGAT CACAGAAACA GGAAAGGCGT CTTATTATGC TGACAAGTTT GAAGGCCGTA AAACTGCCAG TGGGGAAGTA TTCAGACAGG GAGGATTGAC AGCAGCACAT CGCACATTGC CTTTCGGCAC CAAAGTGACT GTTATTAACG TATCAAACGG CCGCTCAGTA AAAGTGCGCA TCAATGACCG TGGACCGTTT GCCGAAGGCA GAGTAATTGA TCTCTCCAAG AAAGCGGCAA AACGTATTGG TATGCTCACA ACAGGTGTCG CGCCTGTAGA GGTAAAATAC AAGAAGAAGA AATAA
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Protein sequence | MMTMKYTRNT ILLLSALFFL ASCSKKITET GKASYYADKF EGRKTASGEV FRQGGLTAAH RTLPFGTKVT VINVSNGRSV KVRINDRGPF AEGRVIDLSK KAAKRIGMLT TGVAPVEVKY KKKK
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