Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0707 |
Symbol | |
ID | 8356819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 850231 |
End bp | 851121 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962859 |
Product | protein of unknown function DUF161 |
Protein accession | YP_003120406 |
Protein GI | 256419753 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAA CCAGGAAGAC GCGTGCCCGC ATTAGTTACA TTCAGAATAT TCAGGATATC GTATTGATCG GTATCGGAGT TTTACTGGCA GCCGTCGGGC TGAAAGGATT TCTGTTACCT AATGGCTTCC TCGATGGAGG TGTAACGGGT ATTTCCCTGC TGATAAGCCG GCTCACGGGC TGGTCTATCT CGGTATTGCT GATTGTGATC AATATCCCGT TTATTCTGCT GGCGTACAGA CAATTGTCTG TTGCGTTTAC CATCAGGGCG CTCTGCGCGA TCCTCGGACT GGCCGCTGCC CTGGTGTTTA TTGATGTACC GACTATCACC AGTGACAAAC TGCTGATCGC TATTTTCGGT GGCTTCTTTC TTGGTGCAGG TATTGGTATG TCAGTAAGAG GTGGTGCGGT ACTTGATGGA ACCGAAGTAC TGGCGCTTTA CATCAATCGG AAAACGGTGT TGTCTATGGG TGAAGTGATC ATGTACTTCA ACATTGTGAT ATTCAGTATT GCAGCAGTAC TGATCAATGT GGAAACAGCC TTGTATGCGA TGCTGACCTA TCTGTCGGCC TCTAAAACCG TTGATTTTAT CATCCAGGGT TTTGAAGAAT ACATTGCACT TACCATTATC TCCAATGAAA GTGAACTCAT AAGAAAAACC CTGACCTTGT CACTTCGTAA AGGCGTAACT GTTTTTAAGG GACAGAGTGG ATTCGGCAAA CGCGGATCTG TTGACAGGGA TATTGATATC ATCTATACTG TTGTTACCCG TCTGGAAGTA CACAAGATCA TCGATGAGAT CGAGAAGATC GATGAAAAGG CTTTCATTGT GCAACACAAT ATCAACGATA CCAAAGGCGG CATGATCAAA CGCCGCGCTA CCCACCATTA A
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Protein sequence | MSQTRKTRAR ISYIQNIQDI VLIGIGVLLA AVGLKGFLLP NGFLDGGVTG ISLLISRLTG WSISVLLIVI NIPFILLAYR QLSVAFTIRA LCAILGLAAA LVFIDVPTIT SDKLLIAIFG GFFLGAGIGM SVRGGAVLDG TEVLALYINR KTVLSMGEVI MYFNIVIFSI AAVLINVETA LYAMLTYLSA SKTVDFIIQG FEEYIALTII SNESELIRKT LTLSLRKGVT VFKGQSGFGK RGSVDRDIDI IYTVVTRLEV HKIIDEIEKI DEKAFIVQHN INDTKGGMIK RRATHH
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