Gene Cpin_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0707 
Symbol 
ID8356819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp850231 
End bp851121 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID644962859 
Productprotein of unknown function DUF161 
Protein accessionYP_003120406 
Protein GI256419753 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAA CCAGGAAGAC GCGTGCCCGC ATTAGTTACA TTCAGAATAT TCAGGATATC 
GTATTGATCG GTATCGGAGT TTTACTGGCA GCCGTCGGGC TGAAAGGATT TCTGTTACCT
AATGGCTTCC TCGATGGAGG TGTAACGGGT ATTTCCCTGC TGATAAGCCG GCTCACGGGC
TGGTCTATCT CGGTATTGCT GATTGTGATC AATATCCCGT TTATTCTGCT GGCGTACAGA
CAATTGTCTG TTGCGTTTAC CATCAGGGCG CTCTGCGCGA TCCTCGGACT GGCCGCTGCC
CTGGTGTTTA TTGATGTACC GACTATCACC AGTGACAAAC TGCTGATCGC TATTTTCGGT
GGCTTCTTTC TTGGTGCAGG TATTGGTATG TCAGTAAGAG GTGGTGCGGT ACTTGATGGA
ACCGAAGTAC TGGCGCTTTA CATCAATCGG AAAACGGTGT TGTCTATGGG TGAAGTGATC
ATGTACTTCA ACATTGTGAT ATTCAGTATT GCAGCAGTAC TGATCAATGT GGAAACAGCC
TTGTATGCGA TGCTGACCTA TCTGTCGGCC TCTAAAACCG TTGATTTTAT CATCCAGGGT
TTTGAAGAAT ACATTGCACT TACCATTATC TCCAATGAAA GTGAACTCAT AAGAAAAACC
CTGACCTTGT CACTTCGTAA AGGCGTAACT GTTTTTAAGG GACAGAGTGG ATTCGGCAAA
CGCGGATCTG TTGACAGGGA TATTGATATC ATCTATACTG TTGTTACCCG TCTGGAAGTA
CACAAGATCA TCGATGAGAT CGAGAAGATC GATGAAAAGG CTTTCATTGT GCAACACAAT
ATCAACGATA CCAAAGGCGG CATGATCAAA CGCCGCGCTA CCCACCATTA A
 
Protein sequence
MSQTRKTRAR ISYIQNIQDI VLIGIGVLLA AVGLKGFLLP NGFLDGGVTG ISLLISRLTG 
WSISVLLIVI NIPFILLAYR QLSVAFTIRA LCAILGLAAA LVFIDVPTIT SDKLLIAIFG
GFFLGAGIGM SVRGGAVLDG TEVLALYINR KTVLSMGEVI MYFNIVIFSI AAVLINVETA
LYAMLTYLSA SKTVDFIIQG FEEYIALTII SNESELIRKT LTLSLRKGVT VFKGQSGFGK
RGSVDRDIDI IYTVVTRLEV HKIIDEIEKI DEKAFIVQHN INDTKGGMIK RRATHH