| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0686 |
|---|
| Symbol | |
|---|
| ID | 8356798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 827047 |
|---|
| End bp | 827763 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644962838 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003120385 |
|---|
| Protein GI | 256419732 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2836] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTGA CCTTGTTATA CGCCTTATCA ATGGGTTTCA TCGGCAGCTT CCACTGCATC
GGTATGTGTG GTCCCATTGC GCTTACCTTA CCGGTACAGC ACCTGGACGG TGTACGTAAA
CAAACGGGCA TTCTTTTATA CAATGCCGGC AGGATCACCG CATATGCCAT TCCCGGCACT
ATTGCCGGAT GGCTTGGACG ACAGTTCTTC CTGGGAGGAT TACAGCAATG GTTATCAGTA
ACGCTTGGAT GTGGTATACT GTTGTTCATC TTATGCCGCT ATGTCCTGAA CAAGGTACAT
ATCCGGATGA ATACCAGCTT TTATGATCGC CACATCAAAA GAATGCTGGG CGATCTCCTG
CGGCGCAGGC AATTACATAC GCTATATGGC ATCGGTTTCC TGAACGGGCT CTTACCCTGC
GGACTTGTCT GGTTTGCTGT CACCGGTGCA ATTGCCACCG GTAGCTACAT CCAGGGCGCT
CTGTTCATGA TGGCTTTCGG TCTGGGTACC TTACCTGCAA TGATCGCTAT TACCTGGTGC
AACGATCTTA TCAGTATCAA CCTGCGTAAC CGTTTACGTC ACTGTATACC TTACGCAATG
ACGATCATGG CACTGCTCCT GATCATGCGC GGGCTCAATC TCAACATTCC TTACGTCAGT
CCGGTATTAC CTGCTCCCAA CGAAAGGGTA ATGCAACACT GTTATAAACC TTCCTGA
|
|---|
| Protein sequence | MFLTLLYALS MGFIGSFHCI GMCGPIALTL PVQHLDGVRK QTGILLYNAG RITAYAIPGT
IAGWLGRQFF LGGLQQWLSV TLGCGILLFI LCRYVLNKVH IRMNTSFYDR HIKRMLGDLL
RRRQLHTLYG IGFLNGLLPC GLVWFAVTGA IATGSYIQGA LFMMAFGLGT LPAMIAITWC
NDLISINLRN RLRHCIPYAM TIMALLLIMR GLNLNIPYVS PVLPAPNERV MQHCYKPS
|
|---|
| |