Gene Cpin_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0684 
Symbol 
ID8356796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp825196 
End bp826578 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content47% 
IMG OID644962836 
Productcytochrome c oxidase accessory protein CcoG 
Protein accessionYP_003120383 
Protein GI256419730 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA CGTTCAGAGA TAGCATCGCT ACTGTTGATA GACAGGGAAA AAGAAGCTGG 
ATATTCAGCC AGCAACCGAA AGGAAAATTT TATAACGCAA GGAGTGTGCT GAGCTTCCTT
TATTTTCTTG CGTTTTTTGC CGGACCGTTC ATTCAGTTGA ACGGCCGGCC CCTGTTTTTA
TTCAATGTTG TAGAAGGTCG GTTCATCCTG TTTGGCGCCA TATTCTGGCC ACAGGATTTT
TTCATTTTCG GTCTGGCTAT GGTGGCCTTC ATTCTGTTTG TCGTATTATT TACCATGGCC
TTTGGCCGCC TGTTCTGCGG ATGGGCATGT CCGCAAACCA TCTTTATGGA GATGCTGTTC
CGCAGAATAG AATACTGGAT CGAAGGAGAC GCCGCCGCAC AGAAAATGCT GCAACAGGCG
CCCTGGAATA CCGACAAAAT AATTAAGAAA ACCAGCAAGC ATATCCTCTT TTACCTCCTG
TCTTTCCTGA TTGCCAATAC CTTCCTGGCT TATATCATCG GTATGAAAAG CCTGACGGAG
ATCATTACCG GACCAGTAAC TGAGCATACC GGCGGACTGG CCACCATGAT CGTTTTTGCA
GGCGTATTCT ACAGCGTATT TGCCTTCTTC AGAGAGCAGG TGTGTACCAT AGTATGTCCA
TATGGACGCT TACAGGGTGT ATTACTGGAC AGGGATTCTG TCGTAGTCGC TTATGATTAT
ACCAGAGGTG AACCACGCGG GCATTTCAAA AAGAATGCGG ACAATAACCT GGGTGATTGT
ATTGATTGTA ATCAATGTGT GAAGGTTTGT CCGACTGGTA TCGACATCCG CAACGGTACA
CAGCTTGAGT GTGTGAATTG TACCGCCTGC ATAGACGCGT GTAACTTCAT GATGGAAAAA
GTAGGTCGCC CGCTGGATCT CATCCGTTAC GCCTCCGAAA ATGGGATCGC CAATAAACAG
CCTTTACGCT TTACACCACG ACTGAAGATC TATACTTCCA TACTGGTTAT TTTGCTGACA
GCCATCACCT GGATGTTGGC CAGCCGCAAA CCTGTCAGCG GTACAATTAT CCGTACCGCA
GGTATGTTAT ACCAGGAAAG AGGCCTAGAC AGTATCTCTA ATCTTTACCG TATCAAACTT
GTCAACAAGA CAACCGCCGA CATCCCCCTG ACGCTCAGAC TGGAAGATGT ACACGGTAAA
ATAGAGTTGC TGGGTCACCC GCAGATACTG GTAAAAGAAG AAGATCAGGG TGAGGGTATT
TTCTTTGTGA TACTACCCCG TACAGCGATC AGCAAACGTA AGACGCCTCT TCGCATTTCC
CTCTATGAAG GAGATAAAAA GACCGGTACA CTCAACACCA CATTTCTGGG ACCGGCCAGA
TAA
 
Protein sequence
MEETFRDSIA TVDRQGKRSW IFSQQPKGKF YNARSVLSFL YFLAFFAGPF IQLNGRPLFL 
FNVVEGRFIL FGAIFWPQDF FIFGLAMVAF ILFVVLFTMA FGRLFCGWAC PQTIFMEMLF
RRIEYWIEGD AAAQKMLQQA PWNTDKIIKK TSKHILFYLL SFLIANTFLA YIIGMKSLTE
IITGPVTEHT GGLATMIVFA GVFYSVFAFF REQVCTIVCP YGRLQGVLLD RDSVVVAYDY
TRGEPRGHFK KNADNNLGDC IDCNQCVKVC PTGIDIRNGT QLECVNCTAC IDACNFMMEK
VGRPLDLIRY ASENGIANKQ PLRFTPRLKI YTSILVILLT AITWMLASRK PVSGTIIRTA
GMLYQERGLD SISNLYRIKL VNKTTADIPL TLRLEDVHGK IELLGHPQIL VKEEDQGEGI
FFVILPRTAI SKRKTPLRIS LYEGDKKTGT LNTTFLGPAR