| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0681 |
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| Symbol | |
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| ID | 8356793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 821728 |
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| End bp | 823854 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962833 |
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| Product | putative bifunctional cbb3-type cytochrome c oxidase subunit I/II |
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| Protein accession | YP_003120380 |
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| Protein GI | 256419727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I
[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.677524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG AAAAATTTTC GTACGATAAC CGTACCGTGA AATGGTTTGC ATACGCCTGT
ATCGGCTGGG GGCTGGTCGG TATGCTCGCT GGATTATGGG CTGCACTGGC GCTCGTGCTT
CCCGATCTGA ATCTTGGCTA TGCACCTACA ACATTTGGCC GTCTGAGGCC CGTTCACACC
AACGCTGTCA TCTTCGCCTT TGTAGGTAAC GGTATCTTCA TGGGTGTGTA TTACTCCCTC
CAACGCCTTT GTAAAGCGCG CATGTTCAGC GATCTGCTGA GTAAGATTCA TTTCTGGGGA
TGGCAGGCCA TCATCGCGGG TGGCGCTATC ACTTTGCTGA TGGGTTGTAC TACCGGTAAA
GAATACGCAG AACTGGAATG GCCTTTTGAT ATCGCTATCA CACTGATCTG GGTTGTATTC
GGTGCAAACA TGCTTGGTAC AATCCTCCGT CGTCGTGAAA TGCACCTGTA CGTAGCCATC
TGGTTCTACA TCGGTACATG GGTGGCTATT GCGATGCTCC ATATTGTGAA CTCCTTTGAA
ATGCCGGTTT CCTTCCTGAA AAGTTACTCC TGGTATGCAG GTGTACAGGA TGCTCTGGTT
CAATGGTGGT ATGGACACAA TGCGGTGGCC TTCTTCCTGA CCACGCCTTA CCTTGGACTC
ATGTATTACT TCGTGCCTAA AGCGGCTAAC AGACCCGTAT ACTCTTACCG CTGGTCTATC
ATCCACTTCT GGGCGCTGAT ATTCATCTAT ATCTGGGCAG GACCTCACCA CCTGCTATAT
ACCGCATTGC CTGAATGGGC ACAATCACTG GGTACTGTAT TCTCTATCAT GCTGATCGCC
CCATCCTGGG GAGGTATGCT GAACGGCCTG CTGACACTGC GTGGTGCATG GGATCGTGTA
AGAGAAGACG CTATTCTCAA GTTCTTCGTA GTAGCGCTGA CCTGTTATGG TATGGCTACT
TTCGAAGGCC CGATGCTGTC ACTGAAAAAT GTGAACGCCA TCAGCCACTA TACTGACTGG
ACTATCGCAC ACGTACACGT AGGTGCCCTG GGATGGAATG GATTCCTCAC ATTCGGTATC
CTGTACTGGA TGTTACCTCG TCTGTTCTCT ACACAGCTGT ATTCCCGTAA ATGGGCGAAC
ACACACTTCT GGCTGGGTAC ACTGGGTATT ATCTTCTATG TTATTCCGCT GTACTGGGCC
GCCTTCACAC AAAGCATGAT GTGGAAACAA TTTACTCCGG AAGGACAGCT GAAATTCCAG
TTCCTGGAAA CGGTTGCGAC TGTTGTGCCG ATGTATGCGC TTCGCGGATT AGGTGGCGTA
CTGTATATCT CCGGTGTGGT ACTGATGATC TTCAACCTGG CTAAGACTGT GCGCAGCGGA
TCATTCGTTG CCAACGAGCC TGCTGAAGCA GCACCTCTGC CAAAAGAAGT ACATACACAC
GGTAAATCTC ACTGGCATAA CTGGATCGAA CGCAGACCTA TACAGCTCGC TGTTTTCAGT
CTGATTGTAG TCGGCATAGG CGGTATCCTG GAACTGATTC CGACCTTCCT CGTAAGAAGC
AATATCCCTA CTATCACCAG CGTAAAACCA TACACACCGC TTGAACTGCA CGGTCGTGAT
GTATACATCA GAGAAGGTTG TTACACCTGC CACTCTCAGA TGATCCGTCC ATTCCGCGAT
GAAGTAGCCC GTTACGGTGA ATACTCCAAA GCCGGTGAAT TCATTTATGA CCACCCGTTC
CAATGGGGTT CAAAAAGAAC TGGTCCTGAC CTGGCGAGAA TAGGAGGCAA GTATCCGCAC
TCATGGCATT ACAACCACAT GCTCGATCCG ACCTCTATGT CTCCTGGCTC TATCATGCCG
CAATATCCAT GGTTATTTGA CGAGAAGATC GACAAAGCCA AGACACCGGC AATGATCAAT
GCCATGCGTA AACTGGGTGT GCCTTATCCT GCAGGTTATG AAGCGAAAGC AAATGCCGAC
ATGCAGCAAC AGGGTGAAGC AATCGCTGCA GCGCTGAAGA AAGACAAACT GGAAGTATCC
TCAGATAAAG AAATCGTCGC ACTGATCGCT TATCTGCAAC GCCTTGGTAC AGACATCAAA
TCAAATACAA TCGTGGAGAA AAAATAA
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| Protein sequence | MSLEKFSYDN RTVKWFAYAC IGWGLVGMLA GLWAALALVL PDLNLGYAPT TFGRLRPVHT
NAVIFAFVGN GIFMGVYYSL QRLCKARMFS DLLSKIHFWG WQAIIAGGAI TLLMGCTTGK
EYAELEWPFD IAITLIWVVF GANMLGTILR RREMHLYVAI WFYIGTWVAI AMLHIVNSFE
MPVSFLKSYS WYAGVQDALV QWWYGHNAVA FFLTTPYLGL MYYFVPKAAN RPVYSYRWSI
IHFWALIFIY IWAGPHHLLY TALPEWAQSL GTVFSIMLIA PSWGGMLNGL LTLRGAWDRV
REDAILKFFV VALTCYGMAT FEGPMLSLKN VNAISHYTDW TIAHVHVGAL GWNGFLTFGI
LYWMLPRLFS TQLYSRKWAN THFWLGTLGI IFYVIPLYWA AFTQSMMWKQ FTPEGQLKFQ
FLETVATVVP MYALRGLGGV LYISGVVLMI FNLAKTVRSG SFVANEPAEA APLPKEVHTH
GKSHWHNWIE RRPIQLAVFS LIVVGIGGIL ELIPTFLVRS NIPTITSVKP YTPLELHGRD
VYIREGCYTC HSQMIRPFRD EVARYGEYSK AGEFIYDHPF QWGSKRTGPD LARIGGKYPH
SWHYNHMLDP TSMSPGSIMP QYPWLFDEKI DKAKTPAMIN AMRKLGVPYP AGYEAKANAD
MQQQGEAIAA ALKKDKLEVS SDKEIVALIA YLQRLGTDIK SNTIVEKK
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