| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0621 |
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| Symbol | |
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| ID | 8356732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 758185 |
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| End bp | 760014 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962772 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003120320 |
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| Protein GI | 256419667 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCA TTTCCCGTAC GCCATTCCCG GCGTCCAGAA AAATCTACGT CGATGGCGTC
GCCATGAGAG AAATAACGCT GACAAACACA CGCCTGCACG GTTCTAAAGG GGAGGAAGTT
CCCAATGCAC CGGTAGTGGT ATATGATACC AGCGGACCAT ACACCGATCC TGATGCTCAC
ATCGATGTAC GCCAGGGTCT GCCCAGACTG CGTGAAAAAT GGATCCTCGA TCGTGACGAT
GTGGATAAAC TGCCAGGTAT CACTTCTGAT TATGGCAGAC AAAGACTGGA AGACAATCGT
CTCGACTCCC TGCGCTTTTC TTATCAGCAT TCTCCGATGA GAGCAAAAGC CGGCCATAAC
GTATCCCAGA TGCACTATGC TAAAAAAGGC ATCATCACCC GGGAGATGGA ATACATCGCC
ACGCGTGAAA ACCAGTGCGT AGAAAAACTC TTCCAGGAAA ATAATGCCCT CTGGCAACAA
CACAAAGGAC AATCCTTCGG CGCTAATACG CCCGTAAAGT TCATCACCCC TGAATTCGTC
AGACAGGAAG TAGCTGCCGG CCGCGCCATC ATTCCCAATA ATATCAATCA CCCGGAAAGT
GAACCCATGA TCATCGGGCG CAATTTCCTG GTGAAGATCA ATGCCAACAT CGGTAACTCC
GCCGTTACCT CCAGCATAGA AGAAGAAGTA GAAAAAGCCG TATGGGCCTG CCGCTGGGGC
GCTGATACCA TCATGGATCT CAGCACCGGC AAACACATTC ATGAAACAAG AGAATGGATC
ATCCGTAACT CTCCTGTGCC TATCGGTACC GTACCAATCT ATCAGGCACT GGAAAAAGTG
AACGGAAAAG CAGAAGAGCT GAACTGGGAA ATATTCCGTG ATACCCTGAT TGAACAGGCA
GAACAGGGTG TTGACTACTT CACCATTCAT GCCGGCGTAC TGCTGCGTTA TGTACCACTT
ACCGCACGAC GCACGACCGG TATCGTATCC CGTGGTGGAT CGATCCTCGC AAAATGGTGT
CTGGCACATC ACAAGGAAAA CTTCCTCTAT ACCCATTTTG AAGAAATCTG CGAGATCATG
AAGGCATACG ATGTCGCCTT TTCTCTGGGA GATGGTTTAC GTCCGGGTAG TATCGCCGAT
GCAAATGATG CAGCACAATT CGCAGAACTG GAAACACTCG GCGAACTGAC ACACCACGCC
TGGAAACATG ATATACAGAC CATGATCGAA GGACCAGGAC ACGTACCGAT GCACCTGATC
AAGGAGAACA TGGATAAACA GCTGGAGCAT TGTAAAGAAG CGCCGTTCTA CACACTCGGC
CCCTTAACTA CAGACATCGC CCCAGGTTAC GACCATATCA CATCCGCTAT CGGAGCCGCA
ATGATCGGCT GGTTCGGTAC CGCTATGCTG TGTTACGTAA CACCAAAAGA ACACCTCGGA
TTGCCTGATA AAGAAGATGT AAGACAAGGG GTTATCACTT ATAAAATTGC CGCTCATGCC
GCCGACCTCG CAAAAGGTCA TCCTGGTGCG CAACACCGTG ACAACGCATT GAGTAAAGCC
CGCTTTGAAT TCAGATGGGA AGACCAGTTC AATCTGTCTC TCGATCCGGA AACAGCACGT
TCTTATCATG ACGAAACACT GCCTGCCGAA GGTGCAAAAG TGGCTCACTT CTGCTCCATG
TGCGGACCAC ATTTCTGTTC GATGAAGATC ACACAGGAAG TACGCGATTA TGCCGCTTCT
CAACAGATAG ATGAAACGCT GGCACTGGAA ACAGGAATGG CGGAACAGGC GAACGCATTC
AAAGAACAGG GTGGGGCCAT CTATTTTTAA
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| Protein sequence | MHSISRTPFP ASRKIYVDGV AMREITLTNT RLHGSKGEEV PNAPVVVYDT SGPYTDPDAH
IDVRQGLPRL REKWILDRDD VDKLPGITSD YGRQRLEDNR LDSLRFSYQH SPMRAKAGHN
VSQMHYAKKG IITREMEYIA TRENQCVEKL FQENNALWQQ HKGQSFGANT PVKFITPEFV
RQEVAAGRAI IPNNINHPES EPMIIGRNFL VKINANIGNS AVTSSIEEEV EKAVWACRWG
ADTIMDLSTG KHIHETREWI IRNSPVPIGT VPIYQALEKV NGKAEELNWE IFRDTLIEQA
EQGVDYFTIH AGVLLRYVPL TARRTTGIVS RGGSILAKWC LAHHKENFLY THFEEICEIM
KAYDVAFSLG DGLRPGSIAD ANDAAQFAEL ETLGELTHHA WKHDIQTMIE GPGHVPMHLI
KENMDKQLEH CKEAPFYTLG PLTTDIAPGY DHITSAIGAA MIGWFGTAML CYVTPKEHLG
LPDKEDVRQG VITYKIAAHA ADLAKGHPGA QHRDNALSKA RFEFRWEDQF NLSLDPETAR
SYHDETLPAE GAKVAHFCSM CGPHFCSMKI TQEVRDYAAS QQIDETLALE TGMAEQANAF
KEQGGAIYF
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