Gene Cpin_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0620 
Symbol 
ID8356731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp757828 
End bp758031 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content50% 
IMG OID644962771 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_003120319 
Protein GI256419666 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGC TTGTAAACAA TAAACTTTAT GCGGTGCAGC CAGGAACAAC TGTCGCTGCC 
CTCTTACAGT TTATCCAACT ATCATCAGAA AAAGGCGTAG CCATCGCCGT CAACAGCCAG
GTTATACCAA AGACCTCCTG GCCCGATCAG ACCTTGCAGT CCGCTGATAA GGTCACGATC
ATCCGTGCCA CGCAGGGAGG ATAA
 
Protein sequence
MEVLVNNKLY AVQPGTTVAA LLQFIQLSSE KGVAIAVNSQ VIPKTSWPDQ TLQSADKVTI 
IRATQGG