Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0616 |
Symbol | |
ID | 8356727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 754546 |
End bp | 755664 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962767 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003120315 |
Protein GI | 256419662 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA TCGTTTCTTC CTCTACTTTG TTAAAACAAT TGCAGCAGAT CAGCGGGGTG ATCAACTCTA ATACGGTGTT GCCTATATTG GAAGATTTCC TTTTCCTGAT CGATAAGAAC GAACTGACTG TAGTAGCTAC GGATCTCGAG ACTGTGATGA AGGTAAAGCT GGAGGTTGAA GCCAAAGAAA GCGGCCGTAT CTGTATCCCG GCTAAGATCC TGATGGATTC ACTCAAAAAC CTGCCTGACC AGCCGCTCAC GTTTCATATA GATCTTAACT CATACGCGGT TGAAATTACT TCCGACAACG GTAAGTACAA GGTGATGGGA GAGAATCCTG AGAACTTCCC GAAAGAACCA GCTGCGGATG ATACAACTTC ATTCACCGTT TCAGCAACAG CCCTGGTTAC AGCCATCAAC AAAACCCTGT TTGCCGTAAG CAACGACGAC CTTCGTCCTG CCATGACAGG TGTTTTCTTC GAACTGACAC CAACCAGCCT CACTTTCGTA GCAACCGACG CTCACCGTCT GGTAAAATAC GTTAGAACCG GCGTTGAATG CCCGAAAGCA GAAACCTTCA TCGTGCCTAA AAAACCGCTG AACCTGCTGA AATCCGCATT ACCTGACAAC GACAGCGAAA TTAAAATCGC CTATAGCCAG AACCACTTCT TCGTAATGCA TGATGGCGCC CAGATGATCT GTCGCCTGAT CGACGCAAGA TTCCCTGACT ATAAAGTGGT TATTCCAAAA GATAACCCGT ACCGCCTGAC AGTCGCTAAA AGTGATTTCC AGAACGCGCT GAAACGCGTA AGCGTTTTTG CCAACAAGAG CACCAACCAG GTAGCCCTGA GCATCACCGG TAGCGAACTG CAACTATCTG CACAGGACGT TGACTTCTCT TTCGAAGGTA ATGAGCGTAT GAGTTGCCAG TACACCGGCG ACGATATGCA GATCGCTTTC AACGCGAAGT TCCTGATCGA AATGCTGAAC GCAGCAGAAG GTGATGAAAT CACGATCGAA TTGTCTACAC CAACCAAAGC AGGTATCCTG AAACCTTCTG AAAAAGAAGA AAACGAAGAC CTGCTGATGC TGGTAATGCC GCTTATGTTG AATAACTAA
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Protein sequence | MKFIVSSSTL LKQLQQISGV INSNTVLPIL EDFLFLIDKN ELTVVATDLE TVMKVKLEVE AKESGRICIP AKILMDSLKN LPDQPLTFHI DLNSYAVEIT SDNGKYKVMG ENPENFPKEP AADDTTSFTV SATALVTAIN KTLFAVSNDD LRPAMTGVFF ELTPTSLTFV ATDAHRLVKY VRTGVECPKA ETFIVPKKPL NLLKSALPDN DSEIKIAYSQ NHFFVMHDGA QMICRLIDAR FPDYKVVIPK DNPYRLTVAK SDFQNALKRV SVFANKSTNQ VALSITGSEL QLSAQDVDFS FEGNERMSCQ YTGDDMQIAF NAKFLIEMLN AAEGDEITIE LSTPTKAGIL KPSEKEENED LLMLVMPLML NN
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