| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0609 |
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| Symbol | |
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| ID | 8356720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 746864 |
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| End bp | 747925 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962760 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003120308 |
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| Protein GI | 256419655 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.593708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TTCTTATCTG GAGCGCAGTG ACCATCGCAG CTGTTGTATT GATCATGTGG
AAACTGGGCG CCAATAAAAA AGCCAACGAA GCCAAAACGG AATTTGTAAA GACGAGCAAT
GCAGGGGAAG TACCCGTACT GGTGGAAAAA GTGGCAAAAT CTGATTTCTC TCAAGGCTTT
CTGGCCAATG GTAACTTCAC GCCTTTCCGT GAACTGACCT ATCTCTCCGA AGTAACCGGC
CGTATCAATA AACTGTTGGT AGATGAGGGA AGTGTTGTAA GACAAGGGCA GGCAATTGCG
AATGTTGATG GTGAAATCCT GGGTACAGAT CTGCAGGCGG CTAAAACCAA TCTGGAGCAA
CTGAGAGTGG ATAAAGAAAG ATATGAAGCG GCCTTTAAAA CAGGTGGTGT AACCAAAAAA
CAGGTAGACG ACGCTACGTT GCAATACGAC CTGGCAAAAA CAAAATATGC GGCTGCCAGC
CGTCGTGTGG GTGATACCTA TATCAAAGCG CCTATCAGTG GTGTGATCAA CAAAAAATAC
ATAGAGCAGG GTGCTTACCT CTCTCCTGGT AATAAAATGT TTGATATCGT GGACGTTTCC
CGCCTGAAAC TGGCAGTATC TGTTCCGGAA TTACAGGTGG TAAACCTGAA AGAAGGTGAT
AAAGTACGGG TGACTTCCAG CGTATTCCCG GAAGTGAGCT ACGATGGTCA TGTGACTTTC
ATCGCTGCAA AAGGTGATAA TACCCTCAAC TACCCAGTTG AAATGGAAGT GACTAACAAC
GGTGGCAAAC AACTCAGAGC AGGTATGTAT GGTACCGCAC ACTTCGAAAT GAAAGACGCG
ATCCCGACTA TCCTGGTAGC GCGTACCGCA TTCATCGGTG GAGTGAACAG CAACCAGGTA
TATGTACTGG AGAATAATAC AGCTAAAGTG CGTAAGGTAG TAGCCGGACG TATCTATGGC
GACAAAGTGG AAATAAGAGA AGGTCTGAAT GAAGGCGAAA CCGTTATCAC CAGCGGACAA
ATCAACCTGG TAGACGGATC TAAAGTATCC GTACAAAAAT AA
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| Protein sequence | MKKILIWSAV TIAAVVLIMW KLGANKKANE AKTEFVKTSN AGEVPVLVEK VAKSDFSQGF
LANGNFTPFR ELTYLSEVTG RINKLLVDEG SVVRQGQAIA NVDGEILGTD LQAAKTNLEQ
LRVDKERYEA AFKTGGVTKK QVDDATLQYD LAKTKYAAAS RRVGDTYIKA PISGVINKKY
IEQGAYLSPG NKMFDIVDVS RLKLAVSVPE LQVVNLKEGD KVRVTSSVFP EVSYDGHVTF
IAAKGDNTLN YPVEMEVTNN GGKQLRAGMY GTAHFEMKDA IPTILVARTA FIGGVNSNQV
YVLENNTAKV RKVVAGRIYG DKVEIREGLN EGETVITSGQ INLVDGSKVS VQK
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