Gene Cpin_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0575 
Symbol 
ID8356685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp703292 
End bp703777 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID644962725 
Productprotein of unknown function DUF458 
Protein accessionYP_003120274 
Protein GI256419621 
COG category[S] Function unknown 
COG ID[COG1978] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACACA TCAACAAATG GAGGCGGCTT AACGGAGACG AAATACAACG GCCTATCGCA 
GATGAAATTA CTGAAATGCT GATCGCTGAA AGAGAAGCTG GTAATGATCT CAAAGTCTGT
ATCGGCACCG ATAGCCAGGT AAAGGGACGA ATCACAGAAT TCGCCACCGT TATCGTTTTT
CTCCGGAAAG GTAAAGGTGG ATTCATGTAT ATCCACAACT TCAGCACACA ACGAAAAATG
AGCATCAAAG AAAGGATGCT GGAAGAAGTG GGCAGAAGTA TAGAAGTGGC TTACTCATTG
TGTCACATTT TCACAGCATA TAATGTGGAC ATGGAAGTAC ATGCAGACAT CAACACCAAT
CCGAACTTCA GGAGTAATGA TGCATTGAAA GAAGCAATGG GGTACATCAT GGGAATGGGC
TTTACCTTTC GGGCAAAGCC TCACGCCTTC GCAAGTACCT CCTGCGCAAA TAAAATAGTA
CACTAA
 
Protein sequence
MQHINKWRRL NGDEIQRPIA DEITEMLIAE REAGNDLKVC IGTDSQVKGR ITEFATVIVF 
LRKGKGGFMY IHNFSTQRKM SIKERMLEEV GRSIEVAYSL CHIFTAYNVD MEVHADINTN
PNFRSNDALK EAMGYIMGMG FTFRAKPHAF ASTSCANKIV H