Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0562 |
Symbol | |
ID | 8356668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 683659 |
End bp | 684558 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962708 |
Product | PfkB domain protein |
Protein accession | YP_003120261 |
Protein GI | 256419608 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAT ACAAAGTTGC CTGTTTTGGA GAAGTGCTCT GGGATATTTT GCCGGATAAG GCCCTACCCG GAGGAGCTCC TATGAATGTG GCCTATCATC TTCAGAAATT GTCTGTTCCC GCAGCAATGA TATCCGGTAT CGGAGATGAT GAACAGGGAA AATCCCTGTT GGAGCTGATG AAGCGATATC AGCTCACAAC CGACTTTGTC CAGATAGATC CGGTACATGA AACGGGTAAA GTATATGCAC GTCCTTCCCC GGATAATCCG CTGGAAATGA AATACGAGAT TGTTCAACCG GTAGCATGGG ATTATATTGC CTTTACGCCT GCCTTGAAAG AACTCGCACA ACAGACCGAT AATACCTTTC TCGTATTCGG CAGTCTTGCG GCAAGAAATG CAGACAGCCG GCAAACCTTA CAATCACTCC TGGAAGGCAA CCGCACTTTC GTATTGGATA TCAATCTGCG TCCGCCGCAT TTTGAACAGG AACTACTTGT CAGCCTGCTG CATCAATGCC ATATCCTGAA ACTGAATGAA TCAGAATTGT CTATCATCGG CAGCTGGCAC CAATGGCCGG ATACCATGGA AGCACAGGTA AAAGCATTAA GTCTTCAATA TGCGATTCCA ACGATCATTG TCACATTGGG TGAAAATGGC GCGGCACTAT TCACAGAAGG AAAATTCTAT CAGCATCCCG GTTATAAAGT AAAAGTGGCA GATACAATCG GCAGTGGAGA CGCCTTTCTA GCAGGATGTC TGTATAGCAT CATCAAAAAA TATTCACCGG CAGATACCTT ATCATTTGCT TGTGCCATGG GCGCACTCGT AGCATCCTAT CATGGTGGTT GCCCTGATTA CCAACGTGTA GAGATAACTA CATTGATGGC AGCGCATTAA
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Protein sequence | MTQYKVACFG EVLWDILPDK ALPGGAPMNV AYHLQKLSVP AAMISGIGDD EQGKSLLELM KRYQLTTDFV QIDPVHETGK VYARPSPDNP LEMKYEIVQP VAWDYIAFTP ALKELAQQTD NTFLVFGSLA ARNADSRQTL QSLLEGNRTF VLDINLRPPH FEQELLVSLL HQCHILKLNE SELSIIGSWH QWPDTMEAQV KALSLQYAIP TIIVTLGENG AALFTEGKFY QHPGYKVKVA DTIGSGDAFL AGCLYSIIKK YSPADTLSFA CAMGALVASY HGGCPDYQRV EITTLMAAH
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