Gene Cpin_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0562 
Symbol 
ID8356668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp683659 
End bp684558 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content46% 
IMG OID644962708 
ProductPfkB domain protein 
Protein accessionYP_003120261 
Protein GI256419608 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAT ACAAAGTTGC CTGTTTTGGA GAAGTGCTCT GGGATATTTT GCCGGATAAG 
GCCCTACCCG GAGGAGCTCC TATGAATGTG GCCTATCATC TTCAGAAATT GTCTGTTCCC
GCAGCAATGA TATCCGGTAT CGGAGATGAT GAACAGGGAA AATCCCTGTT GGAGCTGATG
AAGCGATATC AGCTCACAAC CGACTTTGTC CAGATAGATC CGGTACATGA AACGGGTAAA
GTATATGCAC GTCCTTCCCC GGATAATCCG CTGGAAATGA AATACGAGAT TGTTCAACCG
GTAGCATGGG ATTATATTGC CTTTACGCCT GCCTTGAAAG AACTCGCACA ACAGACCGAT
AATACCTTTC TCGTATTCGG CAGTCTTGCG GCAAGAAATG CAGACAGCCG GCAAACCTTA
CAATCACTCC TGGAAGGCAA CCGCACTTTC GTATTGGATA TCAATCTGCG TCCGCCGCAT
TTTGAACAGG AACTACTTGT CAGCCTGCTG CATCAATGCC ATATCCTGAA ACTGAATGAA
TCAGAATTGT CTATCATCGG CAGCTGGCAC CAATGGCCGG ATACCATGGA AGCACAGGTA
AAAGCATTAA GTCTTCAATA TGCGATTCCA ACGATCATTG TCACATTGGG TGAAAATGGC
GCGGCACTAT TCACAGAAGG AAAATTCTAT CAGCATCCCG GTTATAAAGT AAAAGTGGCA
GATACAATCG GCAGTGGAGA CGCCTTTCTA GCAGGATGTC TGTATAGCAT CATCAAAAAA
TATTCACCGG CAGATACCTT ATCATTTGCT TGTGCCATGG GCGCACTCGT AGCATCCTAT
CATGGTGGTT GCCCTGATTA CCAACGTGTA GAGATAACTA CATTGATGGC AGCGCATTAA
 
Protein sequence
MTQYKVACFG EVLWDILPDK ALPGGAPMNV AYHLQKLSVP AAMISGIGDD EQGKSLLELM 
KRYQLTTDFV QIDPVHETGK VYARPSPDNP LEMKYEIVQP VAWDYIAFTP ALKELAQQTD
NTFLVFGSLA ARNADSRQTL QSLLEGNRTF VLDINLRPPH FEQELLVSLL HQCHILKLNE
SELSIIGSWH QWPDTMEAQV KALSLQYAIP TIIVTLGENG AALFTEGKFY QHPGYKVKVA
DTIGSGDAFL AGCLYSIIKK YSPADTLSFA CAMGALVASY HGGCPDYQRV EITTLMAAH