| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0558 |
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| Symbol | |
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| ID | 8356664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 679345 |
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| End bp | 680472 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962704 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003120257 |
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| Protein GI | 256419604 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC AATCAGCTAC AGCTACTAAT AAAGGTGCCA ATAATGTACA GGAGGCTCCC
AAAAAGAGGA ACTATCGTTT CATCATCGTA TTGGCAGTCC TTGTTATCGG TGGTGGTGCA
TTCGGTATCT CAAAATATAT TCACTCCCTT CACCATGAAG AAACCGACAA CGCACAGGTA
GAAGCAAACG TGAGCCCTGT CATCCCTCGT GTAACAGGAT ATGTAAAAGA AGTTCGTGTA
AAAGATAACC AGGTTGTAAA GCAAGGCGAT ACACTGGTAG TGCTGGATGA CAGAGATCTG
CAGATCAAAG TTCAACAGGC AGAAGCTGCA CTCGCTGCTG CTGAAGTAAA CGTTCAGGTA
GCAGTTGCTA CTACAAACGC TGCCCGCTCA AATATATCTT CTTCTCAGGC AAACATCTCT
GCAGTAGATG CACAGATCGA AGCTGGTAAA GTAAATGTAT GGCGTGCAAA TCAGGATTAC
GAGCGTTACG CTAACCTGAT TAAAGATCAC TCTATCACAC AACAGCAATA TGAGCAGGCA
CTGGCTGCGA AACAAACTGC TGAACGTCAG CTGAACGTTC TGCAGGAGCA GAAAAAAGTA
GCTGCCCGTC AGACAAGCGC CGTATCTACA CAGAGCGATG CTACCGCTGA ACAGATCAAC
GCTGCTAAAG CAATCATCAA AGAACGTCAG GCTGAACTTG ACAATGCTAA ACTGACTGCA
AGCTATGCGG TGATCCTGGC GCCTGAAAAT GGTGTGGTAT CCAAGATCTA TGTACAGCCA
GGACAGCTGG TACAGGCTGG TCAGTCCCTG TTCAGTGTCG TATTATCTAA CGATGTATGG
GTAGTAGCTA ACTTTAAAGA AACACAGCTG GATAAAATGA AACTTGGCCA GAAAGTAAGC
GTACATATTG ACGCATTCCC TGGTAAGTCC CTGGAAGGTA AAATTACCTC CTTCTCTCCT
GCTACAGGTG CTCGTTTTGC ACTGCTGCCT CCGGATAACG CTTCTGGTAA CTTCGTGAAA
GTAGTACAGC GTCTGCCAGT GAAGATCGAA TTCAATGATC TCAATCAGGC TGAAGTAAAA
CAACTCCGCC CAGGTATGAA CGTACTGGTG GATGTACATC TTGACTAA
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| Protein sequence | METQSATATN KGANNVQEAP KKRNYRFIIV LAVLVIGGGA FGISKYIHSL HHEETDNAQV
EANVSPVIPR VTGYVKEVRV KDNQVVKQGD TLVVLDDRDL QIKVQQAEAA LAAAEVNVQV
AVATTNAARS NISSSQANIS AVDAQIEAGK VNVWRANQDY ERYANLIKDH SITQQQYEQA
LAAKQTAERQ LNVLQEQKKV AARQTSAVST QSDATAEQIN AAKAIIKERQ AELDNAKLTA
SYAVILAPEN GVVSKIYVQP GQLVQAGQSL FSVVLSNDVW VVANFKETQL DKMKLGQKVS
VHIDAFPGKS LEGKITSFSP ATGARFALLP PDNASGNFVK VVQRLPVKIE FNDLNQAEVK
QLRPGMNVLV DVHLD
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