Gene Cpin_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0553 
Symbol 
ID8356659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp673880 
End bp674422 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID644962699 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003120252 
Protein GI256419599 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0765558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA TTCTGATCTT ATTTGCACAT CCTGCATTCG AGAAGTCAAG GGTACATGCA 
CAACTGGTGC GTGCCATCCG GGGTATGCAG GGAGTTACGC TACATGATCT CTATGAAATA
TATCCGGACC TCAATATAGA CGTAAGGCAT GAGCAATCGC TGCTCTTACA GCATGATATC
ATACTGTTTC AACATCCGTT TTACTGGTAC AGCGCTCCGG CAATGATCAA ACAATGGATG
GATCTTGTAC TGGAACATGG CTGGGCTTAT GGCCATACCG GAAATGCATT GAGAGGTAAG
ATAGCAGGGA ATGCTATTTC CGCCGGTTCT CAGGAAGCAG CCTATCACAA AGAAGGCTGG
CACCGGCACT CGGTGAATGA TTTCCTGTTG CCTTTCAGAC AGACGGCTGC ACTCTGCAAC
ATGCAATACC TGGATCCTTT TGTTGTTTAT GGTACGCATA AGTTAAGCCA TCAGGAGATC
AGCGAGGCGG CTATCAGTTA CAGACAAATG CTTGAAAGCT TACGGGATGG GATGGACAAT
TAA
 
Protein sequence
MAKILILFAH PAFEKSRVHA QLVRAIRGMQ GVTLHDLYEI YPDLNIDVRH EQSLLLQHDI 
ILFQHPFYWY SAPAMIKQWM DLVLEHGWAY GHTGNALRGK IAGNAISAGS QEAAYHKEGW
HRHSVNDFLL PFRQTAALCN MQYLDPFVVY GTHKLSHQEI SEAAISYRQM LESLRDGMDN