| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0547 |
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| Symbol | |
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| ID | 8356653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 651230 |
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| End bp | 653245 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962693 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003120246 |
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| Protein GI | 256419593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ATGTACGCTA CTGGCTGGTT ATCGCGCTAT TATGGACTGT TAGCACTGCA
AGAGCGCAGT ATGTATACGA TTATAAGCGG ACCGGTGATA TTTATTTCGA AGCAAAGGAT
TATTACTCTG CAGCTCAATA TTACAACAGG GCCCTGGGTA CTTTTAAGAT AAAACCCGAA
CAGATATTGC CTTACACCGT AGAATTGCGT GGTAAGGAGT CTGGTAAACT GAAGGACTAC
GAAACAGTCA TCTACAAGCT GGCTGAATCA TACAGGCATT ATTACGACTA CGGCAATGCT
GAAAAATACT ATGAGCAGGC GGTAGGTTTC AATAACAATA CACTGTTTCC GCTTGCACGT
TTCTGGTATG GCGTGTGTCT GCGGGCCAAT GGTAAGTATA CCACCGCCCT GGAACAGTTT
ACGAAGTTTA AACAGGAGTA TAACAAAACA GATGATATCA GTGCAAGGGC AACACTGGAA
ATCGCCAGTT GTGAATTTGC GGTATCAGAA GCCAGCAGAA TGCCTGGTTA CACGATCAGT
AAGTTATCCG GTGATGTGAA TGCTGGTGGT GCGAACTACG CTCCTGCTGT ATTGGCTAAG
AATACATTGT TGTATACGTC TTCCCGTCCT GATAGCAGTG ACCTGGAAAA AGAGAAGAAG
TCAAAGAAGG TAAACCCGTA TATCAATAAC CTGTTTGTCG CAACCGGTGA AGGCAGTAAC
TTCAGTAACA GCCGTCCGGT AACCATTCCG GAAGCCAGCG GTATTGATCA GGGGGTGGCT
ACTGTCAGTC CGGATGGAAA TACTATTTAC CTGACCCGCT GGACGACAAA AAATGGCATT
AAAGCTGCTG CTATCTATAG TAGTAAACGC AAAGGAAATG ATTGGGAAGA TCCTAAGGTG
TTAGGTGTAA ATGTAAATGT GGATGGATAT AGTTCCATGC AGCCTTTCGT TACCAGTGAC
GGTAAGTATT TATTGTTTGC GTCTAACAGG CCGGGCGGTA TGGGTAAAAA TGATCTCTGG
TATTGTGCAC TGGAGAATGG CGTTGCCGGT CCGGCAAAGA ATTTTGGTAC CAATATCAAT
ACCCGTGATG AGGAGCAGGC GCCTTTTTAC GATGGAGAAA AGAAAGCGCT TATATTCAGT
ACGGACGGCA GAGTTGGCTT GGGTGGTTTG GATTTCTTTA TCAGTGATGG CGATTTCAGC
AGCTGGGGTT CTCCTAAGAA CCTGGGTTTG CCGCTCAACT CCCCTAAGGA TGACGTTTAC
TTTACAGCAG CTGACAGCGA GCATCCGATG GCGGGAGGTT ATATCAGTTC TGACAGGGAA
TCTGTTTGTT GTCTGGAAGT ATTCACGATT AAAAAGATCT CTAAAATCAT CAGTGGTTTA
GTATTGGATT GCGATGGAGA TCTGCCGCTG ACGGGTGCGA AAGTTACACT GCTGGACACA
ATTGTGCAGC GTGTAATTGG CCAGGTCACA CTGGATGAAA CAGGCCGCTA CCGTTTTGAA
GCAGAGCCGC TTAAACATTA CAAGATCATG GCAGAGAAAG AGAATTATTT CTCAAAAGCG
ATCTATGTAA ATACAGACGA TCTGACAAAA GTTGACTCCA TGGTGAACCC AACTATATGT
CTGAAGCGTT ATGAAATAGG AAAGCCTATC ATCCTGAAAG ATATCTACTA TGATTTCGAC
AAAGCAACGC TTCGTCCGCA ATCACTGATC GTACTGGATA CGGTAGTATC TATCATGCAG
GATAACCCGA ATATCATCAT TGAGATGAGT GCGCATACGG ATAGCAAGGG TAAGGATGAA
TACAACATGA AACTGTCTCA GAAGAGAGCG CAGTCCTGTG TTGATTACCT TATCAGCAAA
GGGATTTCGA GTGAGCGTAT GATCGCGAAA GGGTACGGAG AAACACGGCC TATAGCGCCA
AACACCCTGC CTAATGGCAA GGATAATCCG GAAGGCAGAC AACTGAACAG AAGAACAGAA
TTTAAAGTGT TACGTGTAAC GCAGTTAAAT CAATAG
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| Protein sequence | MKKNVRYWLV IALLWTVSTA RAQYVYDYKR TGDIYFEAKD YYSAAQYYNR ALGTFKIKPE
QILPYTVELR GKESGKLKDY ETVIYKLAES YRHYYDYGNA EKYYEQAVGF NNNTLFPLAR
FWYGVCLRAN GKYTTALEQF TKFKQEYNKT DDISARATLE IASCEFAVSE ASRMPGYTIS
KLSGDVNAGG ANYAPAVLAK NTLLYTSSRP DSSDLEKEKK SKKVNPYINN LFVATGEGSN
FSNSRPVTIP EASGIDQGVA TVSPDGNTIY LTRWTTKNGI KAAAIYSSKR KGNDWEDPKV
LGVNVNVDGY SSMQPFVTSD GKYLLFASNR PGGMGKNDLW YCALENGVAG PAKNFGTNIN
TRDEEQAPFY DGEKKALIFS TDGRVGLGGL DFFISDGDFS SWGSPKNLGL PLNSPKDDVY
FTAADSEHPM AGGYISSDRE SVCCLEVFTI KKISKIISGL VLDCDGDLPL TGAKVTLLDT
IVQRVIGQVT LDETGRYRFE AEPLKHYKIM AEKENYFSKA IYVNTDDLTK VDSMVNPTIC
LKRYEIGKPI ILKDIYYDFD KATLRPQSLI VLDTVVSIMQ DNPNIIIEMS AHTDSKGKDE
YNMKLSQKRA QSCVDYLISK GISSERMIAK GYGETRPIAP NTLPNGKDNP EGRQLNRRTE
FKVLRVTQLN Q
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