Gene Cpin_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0519 
Symbol 
ID8356625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp616344 
End bp617018 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID644962665 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003120218 
Protein GI256419565 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0892634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAG CAGTTACAGC GAAGAAAAAA TGGTGGTCCG GGGGACATTC TCCTTTTAAT 
GTGAGCTACG GAAAGTTGAT GATGTGGTAC TTCCTGATGT CAGATGCCTT TACTTTTGGT
GCATTGCTGA TAGCATATGG TACGATCCGC TTCATGAGCC CATCCTGGCC TGATCCTAAC
GTGGTATTCC ACTCATTCCC TGGTATGGGG CATGCAGATC TCCCGCTGGT ATTCGTGAGC
TTGATGACCT TCATCCTGAT CATGAGTTCT GTAACAATGG TATTGGCTGT ACACGCCGGT
AAAATGAGAG ACCGTCAGGC AGTTGTAAAA TGGATGGCAT GGACTATTCT CGGTGGTGCT
GCGTTCCTGG CTTGTCAGGC ATGGGAGTGG ACACACTTAC ATGAATCCGG TGCATGGTGG
GGTCGTAACC CTTTCCATAA TGTCGATGGT ACAGTCGCAT CTACCAACTT TACTAACTTC
TTCTTTACTA TTACCGGTTT CCACGGTTTA CACGTAACTT CTGGTGTTGT ATTGAATATC
ATCATCCTCG CTAACGTACT GAAAGGTACT TATGAAGAAA GAGGTCATTA TGAAATGGTG
GAGAAAGTAG GTTTATACTG GCACTTTGTA GATCTGGTTT GGGTATTCGT ATTCACCTGT
TTCTATCTGC TCTAA
 
Protein sequence
MDTAVTAKKK WWSGGHSPFN VSYGKLMMWY FLMSDAFTFG ALLIAYGTIR FMSPSWPDPN 
VVFHSFPGMG HADLPLVFVS LMTFILIMSS VTMVLAVHAG KMRDRQAVVK WMAWTILGGA
AFLACQAWEW THLHESGAWW GRNPFHNVDG TVASTNFTNF FFTITGFHGL HVTSGVVLNI
IILANVLKGT YEERGHYEMV EKVGLYWHFV DLVWVFVFTC FYLL