Gene Cpin_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0471 
Symbol 
ID8356577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp568323 
End bp568655 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID644962617 
Producttranslation initiation factor SUI1 
Protein accessionYP_003120170 
Protein GI256419517 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA AAAAAAACAA TACAGGTGGT ATTGTGTATT CCACCAATCC TGATTTCAGA 
CAAGAGGATG AGGAACCGGA AGCCGTGGAG ACATTGCCGC CGGCGCAGCA GCAGTTGCGG
GTGAAGTTGG ATACGAAGCA GCGGGCCGGG AAAGTGGTGA CGTTGGTAGA TGGCTTCGTT
GGGGCTGATG AGGATCTGGA AAAGCTGGGG AAGGAGTTGA AGACGAAGTG CGGGACAGGC
GGAAGTGCGA AAGATGGTCA GATCCTGATA CAGGGGGATT ATAAGGAGAA AGTGGTGAAG
TGGTTGCAGG ATTGGGGGTA TAAAGCCAAG TAG
 
Protein sequence
MSKKKNNTGG IVYSTNPDFR QEDEEPEAVE TLPPAQQQLR VKLDTKQRAG KVVTLVDGFV 
GADEDLEKLG KELKTKCGTG GSAKDGQILI QGDYKEKVVK WLQDWGYKAK