Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0467 |
Symbol | |
ID | 8356573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 563664 |
End bp | 564071 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644962613 |
Product | iojap-like protein |
Protein accession | YP_003120166 |
Protein GI | 256419513 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.979719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCACCCT TAACCGTTCT GAGTACGAGA AAGAAAGCGT TAACGCGCTT GAGTAGAGAA AGCGAGATTT TTTCCACCAT CATCAAGGCC ATCCAGGAAA AAAAGGGAGA AAATATTGTT TCTCTGGATC TGCGCCAGAT TCCTGAAGCT GTGGCTGATT TCTTTGTTAT ATGTGAGGCT AACTCCAACA CACAGGTTAG GGCGATAGCC GACTACGTGG AAGACCAGGT GTCGAAACAC ATCGGCGAAG AGCCTTATAA ACATGAGGGT TTTACCGCGC AACAATGGAT ACTTGTAGAT TATGTGAATG TTGTGGTGCA TGTATTCCAA CCTGAGGCCA GGCAGTTTTA CAGCCTGGAA GATATGTGGA GTGATGCAGA ACGAATGGAG CATAATGATA CGAACTAA
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Protein sequence | MAPLTVLSTR KKALTRLSRE SEIFSTIIKA IQEKKGENIV SLDLRQIPEA VADFFVICEA NSNTQVRAIA DYVEDQVSKH IGEEPYKHEG FTAQQWILVD YVNVVVHVFQ PEARQFYSLE DMWSDAERME HNDTN
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