Gene Cpin_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0467 
Symbol 
ID8356573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp563664 
End bp564071 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID644962613 
Productiojap-like protein 
Protein accessionYP_003120166 
Protein GI256419513 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.979719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACCCT TAACCGTTCT GAGTACGAGA AAGAAAGCGT TAACGCGCTT GAGTAGAGAA 
AGCGAGATTT TTTCCACCAT CATCAAGGCC ATCCAGGAAA AAAAGGGAGA AAATATTGTT
TCTCTGGATC TGCGCCAGAT TCCTGAAGCT GTGGCTGATT TCTTTGTTAT ATGTGAGGCT
AACTCCAACA CACAGGTTAG GGCGATAGCC GACTACGTGG AAGACCAGGT GTCGAAACAC
ATCGGCGAAG AGCCTTATAA ACATGAGGGT TTTACCGCGC AACAATGGAT ACTTGTAGAT
TATGTGAATG TTGTGGTGCA TGTATTCCAA CCTGAGGCCA GGCAGTTTTA CAGCCTGGAA
GATATGTGGA GTGATGCAGA ACGAATGGAG CATAATGATA CGAACTAA
 
Protein sequence
MAPLTVLSTR KKALTRLSRE SEIFSTIIKA IQEKKGENIV SLDLRQIPEA VADFFVICEA 
NSNTQVRAIA DYVEDQVSKH IGEEPYKHEG FTAQQWILVD YVNVVVHVFQ PEARQFYSLE
DMWSDAERME HNDTN