Gene Cpin_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0436 
Symbol 
ID8356542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp520474 
End bp520854 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content44% 
IMG OID644962582 
Productglycine cleavage system H protein 
Protein accessionYP_003120135 
Protein GI256419482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC CATCAGAGCT GCGTTACACA AAAGACCATG AATGGGTATT ACTTGAAGGT 
AATACAGCAA CTATCGGAAT CACTGAATTC GCACAACGCG AATTAGGCGA TATCGTATTT
GTAGACATTC CTACCGTAGG TAAAGCCCTT GAAGCCGAAG AAGTTTTCGG TACAGTAGAA
GCTGTGAAAA CCGTTTCTGA CCTGTTCCTG CCGGTTGCAG GTACCATCAA TGAAGTTAAT
GAAGAACTGG AAGGTTCTCC TGAACTGGTT AACCAGGAAC CATACGGAGA TGGCTGGATG
GTAAAAATGA CTGTTAAGAA CCCGGCTGAC GTAGATGGTC TGCTTACTGC AGAAGCTTAT
GCGTCTCTGG TTGCTGAATA A
 
Protein sequence
MNFPSELRYT KDHEWVLLEG NTATIGITEF AQRELGDIVF VDIPTVGKAL EAEEVFGTVE 
AVKTVSDLFL PVAGTINEVN EELEGSPELV NQEPYGDGWM VKMTVKNPAD VDGLLTAEAY
ASLVAE