Gene Cpin_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0382 
Symbol 
ID8356488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp458496 
End bp459023 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content43% 
IMG OID644962529 
ProductYceI family protein 
Protein accessionYP_003120082 
Protein GI256419429 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.350696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCT GGAAAATCGA CGCATCTCAC AGCGATGTAG AATTTAAGGT AAAACACCTG 
ATGATCTCTA GCGTAACTGG ATATTTTGGT AAATATGAAG GAACTGCAGA AAGCAGCAGC
GATGACTTCA CCGATGCAAA GATCACTTTT GAAGCAGATG TAAACAGCAT CAGCACGAAG
AACGAACAGC GTGATCAGCA CTTACAGGCA GAAGACTTCT TCCATGCTGC ACAGTATCCA
AAGCTGAGTT TTGTATCTAC CGGTGTGAAG AAAGTGGACG ATGAGAATTA TAAAGTAACT
GGTGACCTGA CTCTGCGCGG TGTTACCAAA CCAGTAGAAC TGGCTGTAGA ATTCAGCGGT
ATTGTAAAAG ACCCATATGG TCAGACAAAA GCAGGTTTCG ATATTAAAGG TAAAATCAAC
AGAAAGGATT TCGGCGTTTC ATTCCATGCT GTAACTGATA ATGGTGGTCT GGTATTGGGT
GATGAAGTGA AGTTACAGGC GAGTGTACAG CTGGTGAAAC AGGCTTAA
 
Protein sequence
MAIWKIDASH SDVEFKVKHL MISSVTGYFG KYEGTAESSS DDFTDAKITF EADVNSISTK 
NEQRDQHLQA EDFFHAAQYP KLSFVSTGVK KVDDENYKVT GDLTLRGVTK PVELAVEFSG
IVKDPYGQTK AGFDIKGKIN RKDFGVSFHA VTDNGGLVLG DEVKLQASVQ LVKQA