Gene Cpin_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0239 
Symbol 
ID8356343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp289021 
End bp289797 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID644962385 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003119940 
Protein GI256419287 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCATA CCATCAAAAC AGAACTCAAG GATAATACCC TCTTTATCTA CATTAACCGC 
CCCGATAAGC TGAACGCACT GAATCAGCAG GTTATGTCAG AACTGGCGCT GGCTATCGAT
GAAGTATATT CCAATAAAGA TATCCGCAGT GCCGTGATCA CCGGGGAGGG AGATAAAGCG
TTTGTGGCAG GGGCTGATAT TTCCGAATTC CTGGCATTAT CTGATCAGCA GGGAGCAGAG
CTGGCTAAGA AAGGACATGT GGTTTTCAAG CATATAGAAG ATTGCCCCAA ACCTGTGATT
GCCGCTGTGA ATGGTTTTGC ACTGGGGGGA GGTTGTGAAC TGGCGATGGC CTGTCACTTC
AGGATTGCAG CTACCAATGC GAAGTTCGGT CAGCCGGAAG TAAACCTGGG ACTGATCCCT
GGTTATGGCG GTACGCAACG CCTGACGGCG CTCATTGGGA AAGGGAAGGC CCTGGAACTC
ATGATGACAG GCGATAGGAT CAGTGCAGAA GAAGCACTGC AATGGGGACT GGTAAACTAT
GTAGTAGCGC CGGCCGACCT GCTGCCGAAA GCAACGGAAC TATTGCAGAA AATACATACA
AAAGCGCCGC TGGCCATCGC CCGCGTGATC AAATGCGCCA ATGCCTCCCA GAATTATGCG
GTAGATGGTT TTGAAATAGA ACTGAACGAA TTCGGCGCCT GCTTCGCGAC CAAAGATATG
CAGGAAGGCG CCTCTGCCTT TATACAGAAA AGGCCGGCAG TGTTTACGGG GGAATAA
 
Protein sequence
MYHTIKTELK DNTLFIYINR PDKLNALNQQ VMSELALAID EVYSNKDIRS AVITGEGDKA 
FVAGADISEF LALSDQQGAE LAKKGHVVFK HIEDCPKPVI AAVNGFALGG GCELAMACHF
RIAATNAKFG QPEVNLGLIP GYGGTQRLTA LIGKGKALEL MMTGDRISAE EALQWGLVNY
VVAPADLLPK ATELLQKIHT KAPLAIARVI KCANASQNYA VDGFEIELNE FGACFATKDM
QEGASAFIQK RPAVFTGE