Gene Cpin_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0173 
Symbol 
ID8356273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp215459 
End bp217897 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content46% 
IMG OID644962316 
Productphosphoenolpyruvate synthase 
Protein accessionYP_003119875 
Protein GI256419222 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID[TIGR01418] phosphoenolpyruvate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAC GAATTGTAAT TCCTCTTCAG GCATTATGCC TGGAGGATAT CCCTATCGTA 
GGTGGTAAGT GCGCCTCACT TGGAGAAATG ATTGCCAACC TCACCAAAGC AGGTATTAAC
ATACCCTCCG GCTTCGCTAT CACCACAACA GCCTATTATC AGTTTCTGCG TCAAAGTGGC
CTGGAAGATT ATATCCAGGA ACAGATCGCT GGTATTGACT TTACCTCGCT GGTGACCCTG
AGACGAGCGG GACAACGCAT CCGCCAGGCA ATCAGTAATA CCAAATTTCC GCATGAACTC
AGTACAGAGA TCATTAGTGC CTATATGGAA CTCTCCCGGG AATATGGTCA GGACATTACA
GACGTAGCCG TACGTTCTTC CGCTACCGCA GAAGACCTCC CGGATGCATC CTTTGCCGGA
CAGCAGGAAA CTTATCTGAA TGTCAGAGGA CCAGCCGCAT TGATCGATGC CGTACGCAAC
TGCTTCGCAT CTCTCTTCAC TGACAGAGCC ATCAGCTACC GACAAAATTT TGGATATGAC
CACTTCAGTA TAGGCTTATC CGTTTGTATA CAGAAGATGG TCCGCTCAGA TCTCGGTGCT
GCCGGCGTCG CCTTTTCCCT GGATACAGAA TCAGGTTTCA AAGATGTGGT TGTCATCAAC
GCCGCTTTCG GACTGGGAGA AATGGTCGTA CAGGGAGCTG TATCTCCTGA TGAATTTATC
GTATTCAAAC CTGCGCTCAA CGGGCATCAC GCGCCCATCA TTGAAAAACG CCTGGGCGTG
AAAGACAAAA TGATGGTGTA TGGTGAAAGT AATGACCAAC GCACCAAGAT CATCCCGCTT
GACAAAGCCA ATCAGCAAAG ATTCTCATTA CGCGATAAAC AGATTTTGCA ACTTTCCGAA
TGGGTATGCA GAATAGAAGA ATACTATTCG CAGCTCAAAG GAAAATGGTG TCCGATGGAT
ATAGAATGGG CCTTAGATGG GCTCAGCAAC GAATTATTCA TCGTACAGGC CCGCCCCGAA
ACCATTCACT CACAGAAAGA ACATCATACG ATCACCTCCT ATAGTATGGA ACAAAAAGCG
ACGCCCTTAT TAAAAGGGAT TGCAGTAGGA GATAAGATCG CGTCCGGAAA AGTGAATATC
CTTTTCTCAC TGGACAAACG TATTACCGAA GGTTCGGAAT TCAAACCCGG CGATGTACTC
GTTACAGATA TGACAGATCC CGATTGGGAA CCTATCATGA AAATGGCAGC CGCTATTGTG
ACCAATAAAG GAGGACGTAC CTGTCATGCT GCTATTGTAG CAAGAGAAAT GGGGATTCCC
GCCATCGTAG GCTGCGGCAA CGCTACTGAG TTACTCAGTT CCGGTCAGGA TATTACCATC
AGCTGTGCAG AAGGTGATGA AGGCATCATT TATGAAGGAA TCGTGCCTTT CAAAGAAACT
TCGCTTGATC TGCGGGAACT GCCTGAGATC AATACATCGC TGATGCTGAA TGTCGCCTCT
CCTTCAATGG CATTTCAATA TTCACATCTT CCCAACAAGG GCGTCGGACT AGCCAGGGAA
GAATTCATCA TTAACAACTA CATTAAAATA CACCCGCTTG CCTTATTGCA TCATAAAACA
TTGAACGATG CGGCACTAAG CGCAGAGATC ATACAATTGA TCAGAGGATA TGAAAATGAA
GAAGCCTACT TTGTACAAAA GCTAGCCTAT GGCATTGCGA AGATTGCCGC TGCATTTCAT
CCAGGTAAAG TGATTGTACG TTTCTCCGAT TTCAAGAGCA ACGAATACTA CAATCTGCTG
GGAGGAAAGT ACTTCGAACC AGCAGAAGAA AATCCTATGA TCGGTTGGAG AGGTGCATCC
AGGTATTATT CTGAGAAATA TAGCGCAGCC TTCGCGCTTG AATGCAAAGC CATCAAAAAG
GTAAGAGAGG AAATGGGACT GGAGAATGTA GTCGTCATGA TCCCTTTCTG CCGAACAGTC
GACGAACTGC TGAAGGTACT AAGTACCATG AAACAGTATG GTCTTGAAAG AGGGGAAAAC
GGTCTGGAAG TATACCTGAT GGCCGAGATA CCTTCTAATA TCATTATGGC AGAAGAATTC
GCCGCGCATA TTGATGGTTT TTCCATCGGG TCCAATGACC TTACACAACT GACATTAGGA
CTCGACCGCG ACTCTGCACT GATTGCGAAT CTCTATAATG AGCGCAATCC GGCTGTATTA
AGAATGATCA GTATGCTGAT CAGTACCGCT AAAAAGCAAC ATGTGAAAGT AGGTATCTGC
GGACAAGGCC CTTCTGATTT TCCCGACTTC ACAAAGTTTC TCGTTGAACA GGGAATTGAT
AGTATATCAG TCACACCAGA TGCGTTGACG AAAACAGTGA AGGCCATCCA TGAAGCAGAA
GCAATGCTTA GCTTACATAC ACCGGCACAC ATTTTATAA
 
Protein sequence
METRIVIPLQ ALCLEDIPIV GGKCASLGEM IANLTKAGIN IPSGFAITTT AYYQFLRQSG 
LEDYIQEQIA GIDFTSLVTL RRAGQRIRQA ISNTKFPHEL STEIISAYME LSREYGQDIT
DVAVRSSATA EDLPDASFAG QQETYLNVRG PAALIDAVRN CFASLFTDRA ISYRQNFGYD
HFSIGLSVCI QKMVRSDLGA AGVAFSLDTE SGFKDVVVIN AAFGLGEMVV QGAVSPDEFI
VFKPALNGHH APIIEKRLGV KDKMMVYGES NDQRTKIIPL DKANQQRFSL RDKQILQLSE
WVCRIEEYYS QLKGKWCPMD IEWALDGLSN ELFIVQARPE TIHSQKEHHT ITSYSMEQKA
TPLLKGIAVG DKIASGKVNI LFSLDKRITE GSEFKPGDVL VTDMTDPDWE PIMKMAAAIV
TNKGGRTCHA AIVAREMGIP AIVGCGNATE LLSSGQDITI SCAEGDEGII YEGIVPFKET
SLDLRELPEI NTSLMLNVAS PSMAFQYSHL PNKGVGLARE EFIINNYIKI HPLALLHHKT
LNDAALSAEI IQLIRGYENE EAYFVQKLAY GIAKIAAAFH PGKVIVRFSD FKSNEYYNLL
GGKYFEPAEE NPMIGWRGAS RYYSEKYSAA FALECKAIKK VREEMGLENV VVMIPFCRTV
DELLKVLSTM KQYGLERGEN GLEVYLMAEI PSNIIMAEEF AAHIDGFSIG SNDLTQLTLG
LDRDSALIAN LYNERNPAVL RMISMLISTA KKQHVKVGIC GQGPSDFPDF TKFLVEQGID
SISVTPDALT KTVKAIHEAE AMLSLHTPAH IL