Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0173 |
Symbol | |
ID | 8356273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 215459 |
End bp | 217897 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962316 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_003119875 |
Protein GI | 256419222 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAC GAATTGTAAT TCCTCTTCAG GCATTATGCC TGGAGGATAT CCCTATCGTA GGTGGTAAGT GCGCCTCACT TGGAGAAATG ATTGCCAACC TCACCAAAGC AGGTATTAAC ATACCCTCCG GCTTCGCTAT CACCACAACA GCCTATTATC AGTTTCTGCG TCAAAGTGGC CTGGAAGATT ATATCCAGGA ACAGATCGCT GGTATTGACT TTACCTCGCT GGTGACCCTG AGACGAGCGG GACAACGCAT CCGCCAGGCA ATCAGTAATA CCAAATTTCC GCATGAACTC AGTACAGAGA TCATTAGTGC CTATATGGAA CTCTCCCGGG AATATGGTCA GGACATTACA GACGTAGCCG TACGTTCTTC CGCTACCGCA GAAGACCTCC CGGATGCATC CTTTGCCGGA CAGCAGGAAA CTTATCTGAA TGTCAGAGGA CCAGCCGCAT TGATCGATGC CGTACGCAAC TGCTTCGCAT CTCTCTTCAC TGACAGAGCC ATCAGCTACC GACAAAATTT TGGATATGAC CACTTCAGTA TAGGCTTATC CGTTTGTATA CAGAAGATGG TCCGCTCAGA TCTCGGTGCT GCCGGCGTCG CCTTTTCCCT GGATACAGAA TCAGGTTTCA AAGATGTGGT TGTCATCAAC GCCGCTTTCG GACTGGGAGA AATGGTCGTA CAGGGAGCTG TATCTCCTGA TGAATTTATC GTATTCAAAC CTGCGCTCAA CGGGCATCAC GCGCCCATCA TTGAAAAACG CCTGGGCGTG AAAGACAAAA TGATGGTGTA TGGTGAAAGT AATGACCAAC GCACCAAGAT CATCCCGCTT GACAAAGCCA ATCAGCAAAG ATTCTCATTA CGCGATAAAC AGATTTTGCA ACTTTCCGAA TGGGTATGCA GAATAGAAGA ATACTATTCG CAGCTCAAAG GAAAATGGTG TCCGATGGAT ATAGAATGGG CCTTAGATGG GCTCAGCAAC GAATTATTCA TCGTACAGGC CCGCCCCGAA ACCATTCACT CACAGAAAGA ACATCATACG ATCACCTCCT ATAGTATGGA ACAAAAAGCG ACGCCCTTAT TAAAAGGGAT TGCAGTAGGA GATAAGATCG CGTCCGGAAA AGTGAATATC CTTTTCTCAC TGGACAAACG TATTACCGAA GGTTCGGAAT TCAAACCCGG CGATGTACTC GTTACAGATA TGACAGATCC CGATTGGGAA CCTATCATGA AAATGGCAGC CGCTATTGTG ACCAATAAAG GAGGACGTAC CTGTCATGCT GCTATTGTAG CAAGAGAAAT GGGGATTCCC GCCATCGTAG GCTGCGGCAA CGCTACTGAG TTACTCAGTT CCGGTCAGGA TATTACCATC AGCTGTGCAG AAGGTGATGA AGGCATCATT TATGAAGGAA TCGTGCCTTT CAAAGAAACT TCGCTTGATC TGCGGGAACT GCCTGAGATC AATACATCGC TGATGCTGAA TGTCGCCTCT CCTTCAATGG CATTTCAATA TTCACATCTT CCCAACAAGG GCGTCGGACT AGCCAGGGAA GAATTCATCA TTAACAACTA CATTAAAATA CACCCGCTTG CCTTATTGCA TCATAAAACA TTGAACGATG CGGCACTAAG CGCAGAGATC ATACAATTGA TCAGAGGATA TGAAAATGAA GAAGCCTACT TTGTACAAAA GCTAGCCTAT GGCATTGCGA AGATTGCCGC TGCATTTCAT CCAGGTAAAG TGATTGTACG TTTCTCCGAT TTCAAGAGCA ACGAATACTA CAATCTGCTG GGAGGAAAGT ACTTCGAACC AGCAGAAGAA AATCCTATGA TCGGTTGGAG AGGTGCATCC AGGTATTATT CTGAGAAATA TAGCGCAGCC TTCGCGCTTG AATGCAAAGC CATCAAAAAG GTAAGAGAGG AAATGGGACT GGAGAATGTA GTCGTCATGA TCCCTTTCTG CCGAACAGTC GACGAACTGC TGAAGGTACT AAGTACCATG AAACAGTATG GTCTTGAAAG AGGGGAAAAC GGTCTGGAAG TATACCTGAT GGCCGAGATA CCTTCTAATA TCATTATGGC AGAAGAATTC GCCGCGCATA TTGATGGTTT TTCCATCGGG TCCAATGACC TTACACAACT GACATTAGGA CTCGACCGCG ACTCTGCACT GATTGCGAAT CTCTATAATG AGCGCAATCC GGCTGTATTA AGAATGATCA GTATGCTGAT CAGTACCGCT AAAAAGCAAC ATGTGAAAGT AGGTATCTGC GGACAAGGCC CTTCTGATTT TCCCGACTTC ACAAAGTTTC TCGTTGAACA GGGAATTGAT AGTATATCAG TCACACCAGA TGCGTTGACG AAAACAGTGA AGGCCATCCA TGAAGCAGAA GCAATGCTTA GCTTACATAC ACCGGCACAC ATTTTATAA
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Protein sequence | METRIVIPLQ ALCLEDIPIV GGKCASLGEM IANLTKAGIN IPSGFAITTT AYYQFLRQSG LEDYIQEQIA GIDFTSLVTL RRAGQRIRQA ISNTKFPHEL STEIISAYME LSREYGQDIT DVAVRSSATA EDLPDASFAG QQETYLNVRG PAALIDAVRN CFASLFTDRA ISYRQNFGYD HFSIGLSVCI QKMVRSDLGA AGVAFSLDTE SGFKDVVVIN AAFGLGEMVV QGAVSPDEFI VFKPALNGHH APIIEKRLGV KDKMMVYGES NDQRTKIIPL DKANQQRFSL RDKQILQLSE WVCRIEEYYS QLKGKWCPMD IEWALDGLSN ELFIVQARPE TIHSQKEHHT ITSYSMEQKA TPLLKGIAVG DKIASGKVNI LFSLDKRITE GSEFKPGDVL VTDMTDPDWE PIMKMAAAIV TNKGGRTCHA AIVAREMGIP AIVGCGNATE LLSSGQDITI SCAEGDEGII YEGIVPFKET SLDLRELPEI NTSLMLNVAS PSMAFQYSHL PNKGVGLARE EFIINNYIKI HPLALLHHKT LNDAALSAEI IQLIRGYENE EAYFVQKLAY GIAKIAAAFH PGKVIVRFSD FKSNEYYNLL GGKYFEPAEE NPMIGWRGAS RYYSEKYSAA FALECKAIKK VREEMGLENV VVMIPFCRTV DELLKVLSTM KQYGLERGEN GLEVYLMAEI PSNIIMAEEF AAHIDGFSIG SNDLTQLTLG LDRDSALIAN LYNERNPAVL RMISMLISTA KKQHVKVGIC GQGPSDFPDF TKFLVEQGID SISVTPDALT KTVKAIHEAE AMLSLHTPAH IL
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