| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0106 |
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| Symbol | |
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| ID | 8356205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 128386 |
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| End bp | 130833 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962250 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003119810 |
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| Protein GI | 256419157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA AAAAAATTTT GCTATCGGGT AGCCTTTTGC TCTCTTTAGC CTCCTATGGA
CAAACAAAAA AACTGCCGCT ACTCCGTGAG CAGTTACTCG ATGATCACTG GCTTTTCAAA
AAAGATAGTC TGCCGGGCGC AGAAAAAACA GACTTCCCGG AGACAGGCTG GAAGACACTC
CACCTGCCGC ACGACTGGGC TATCGAAGAC CTGCCCGGAC AGAACGACAG TACCATTATC
GGCCCTTTTT ACAAGTATAG CCCGGCACAG GAGCACGGCG CTTATGTTGT AGGGGGTACC
GGCTGGTACC GGAAGTCTTT TGCGTTACCG GCTATTCCCG CCGGACAAAC CGTTGCCATC
CGGTTTGAAG GTGTTTATAT GGACAGCGAC GTCTGGATCA ACGGACATTA TCTCGGTAAT
CACCCCTATG GGTATACGCC CTTTACCTAC GATCTGACAC CCTATCTGGC TGCACCGGGT
AAAAAGAATG TGGTGGCGGT CAGGGTGAAG AATGAAGGAA TTAATTCCCG CTGGTATACC
GGTGCAGGTA TCTACCGTCA TGTGCACCTC GAGGTGCTGC CGGCAGATCA ACTGGTAAAG
GAAGCCACTT TCATCACTTT CCCGGAAGCG GGAAAAACCA AAGCGATTGT ACAGGTATCA
GCGGCTATTA TCAGTCAACA GGATGCCGGC AGAATAGTCG AGATCAGTCT CAGGGATAGC
AGTGGTCAGG TCGTTGCAAC CGCTGCGCAG TCTATCCAGT TAAAAGCAAA AGATACCATC
TCCTTCATAA AACAGCTTAC GGTGCTGAAT CCGGCGCTCT GGTCGCCTGG CAGACCCTAT
CTCTATACAA CCGAAATTAA GCTGTCTGAC ACCGTTAAAA TAGCCAAAGA AAAGGTGTTA
GATGCGCTGA GCTTCCCTAC TGGTATCCGG CGGATCAGTA TCACCGCAAC AAAAGGCTTC
CTGCTCAATG GAGAAAAAGT ATTACTGAAA GGGGGCTGTC TGCATCACGA CAATGGCCTG
CTGGGGGCAG CCGCTTTTGA CCGGGCGGAA GAACGAAAAG TGGAACTCAT GAAAGCAAAC
GGGTTCAATG CGATCCGTAC CAGTCATAAC CCGCCATCTG AAAAATTCCT GGAGGCCTGT
GACCGCCTGG GTATGCTTGT CATCGACGAA CTGTTCGATA TGTGGACAGA ACAGAAACAT
CCGCAGGATT ATCACCGTTT CTTCGCACAA TGGTGGCAAC AGGACTTACG CAGCGTTTTG
TTGCGCGACA GAAACCATCC TTCCGTCATC ATGTGGAGCA TCGGCAATGA GATTCCCGAA
AGGGCTGACA AAGAAGGACT CGCTATTACC AAAGCAATGA TCCACGCCGT ACGCCAGTAT
GACACCACCC GGGCTATCAC GGAGGCGGTC CCTGAATTCT GGGAACGTCC CTATCAGTGG
CAGGCAGCAG ATCCGGTATT TGCCCTGCTG GATGTAGCAG GTTATAACTA CCAGTGGAAA
AACTATGCAC TCGACGAAAG ACGTGTGCCC GGCCGTGTAA TGGTAGGCAC AGAAACACTG
CCCGCCGACC TGTATGACAC CTGGAACCAG GTACAGGGAC TTCCCTTCGT CATCGGTGAT
TTTGTATGGA CCGCCATGGA TTATCTCGGA GAAGCCGGTA TCGGACATTC CACTTACACC
CGCACGGCTC AGGGTAGACG CACCTTTCCC TGGATCAATG CTTTCTGCGG CGATATAGAC
CTGATAGGCA ACAAAAAACC GCAATCTTTT TACCGGGACA TAGTATGGCG GAATAGTCCC
GTAGAGATGC TCGTACACGC ACCTGTTCCC GAAGGGAAAA AAGAGAAAGT AAGTCGCTGG
GGATGGCCGG ATGAATCCGA CTCCTGGACC TGGCGGGGTA TGAACGGGAA AAATATGCAG
GTACGGGTCT TTACACGCGC CAGAAAAATT GACCTGATCC TGAATGATTT CAGGGTCGCT
ACAAAAGAAG TGTCTGATAG TACACCGTTG ACCGTCACCT TTGACGTTCC TTATGCTCCT
GGTCAGTTAA CCGCATTTGC GTATGACAGC AAAGGCAATG AAATAGGGAT TAAAGCAATA
GCAACTGCCA ATCCACCCAC TGCTATCAGA CTGACTGCTG ATCACACGAC GATTGCCGCC
GGTAACGGGT CACTGGCCTA TGTGAAAGTG GAAGTAACTG ACGATCAGGG CAGGGTAGTA
CCTGATGCCA ATTTACCGCT ACAGATCAGC ATCAGTGGAA ACGGTTCTCT CGCAGGTGCA
GGAAATGCTT GTCCGGATTG CCCGGCCAGC TTCCAGCAAC CAAAAATAAA TAGCTATAAA
GGGTATGCTT TGGTCATTTT AAGGGCAAAT GAGCAACCAG GTAATATTAG CGTCGAAGTA
AAGAGTAAGG GGCTGAAAAC GGCCAAAATT GATATTAAAA CGAAATAG
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| Protein sequence | MRLKKILLSG SLLLSLASYG QTKKLPLLRE QLLDDHWLFK KDSLPGAEKT DFPETGWKTL
HLPHDWAIED LPGQNDSTII GPFYKYSPAQ EHGAYVVGGT GWYRKSFALP AIPAGQTVAI
RFEGVYMDSD VWINGHYLGN HPYGYTPFTY DLTPYLAAPG KKNVVAVRVK NEGINSRWYT
GAGIYRHVHL EVLPADQLVK EATFITFPEA GKTKAIVQVS AAIISQQDAG RIVEISLRDS
SGQVVATAAQ SIQLKAKDTI SFIKQLTVLN PALWSPGRPY LYTTEIKLSD TVKIAKEKVL
DALSFPTGIR RISITATKGF LLNGEKVLLK GGCLHHDNGL LGAAAFDRAE ERKVELMKAN
GFNAIRTSHN PPSEKFLEAC DRLGMLVIDE LFDMWTEQKH PQDYHRFFAQ WWQQDLRSVL
LRDRNHPSVI MWSIGNEIPE RADKEGLAIT KAMIHAVRQY DTTRAITEAV PEFWERPYQW
QAADPVFALL DVAGYNYQWK NYALDERRVP GRVMVGTETL PADLYDTWNQ VQGLPFVIGD
FVWTAMDYLG EAGIGHSTYT RTAQGRRTFP WINAFCGDID LIGNKKPQSF YRDIVWRNSP
VEMLVHAPVP EGKKEKVSRW GWPDESDSWT WRGMNGKNMQ VRVFTRARKI DLILNDFRVA
TKEVSDSTPL TVTFDVPYAP GQLTAFAYDS KGNEIGIKAI ATANPPTAIR LTADHTTIAA
GNGSLAYVKV EVTDDQGRVV PDANLPLQIS ISGNGSLAGA GNACPDCPAS FQQPKINSYK
GYALVILRAN EQPGNISVEV KSKGLKTAKI DIKTK
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