Gene Cpin_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0096 
Symbol 
ID8356193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp116800 
End bp117090 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content47% 
IMG OID644962240 
Producthypothetical protein 
Protein accessionYP_003119802 
Protein GI256419149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000138623 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TGAAAGCCCT TCTTTCACTG CCACTTTTTA CGCTATTATT GCTGTTCAGT 
TCATTTTCAC CTAAGCAGGA GCAACAAGTA CAACCTGCCA TTGTGAACTA TGCCTGGTAC
ACGCCTTCCG GTCAGTTTGT AGCCTGGAGT ACGCTGGCGA ATGCTGAAAT TGTGAGTAAT
GCGGATACCA ATCCGGTGAA TGGTACCCTG GTAGCGCTGG GGTATACTGA TGGCGGATTC
GGAGTACCTC CATCCGGTAC GTTGGTATAT CAGTTATACA CGCACCCTTA A
 
Protein sequence
MKNLKALLSL PLFTLLLLFS SFSPKQEQQV QPAIVNYAWY TPSGQFVAWS TLANAEIVSN 
ADTNPVNGTL VALGYTDGGF GVPPSGTLVY QLYTHP